Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq6123 228 1e-57 seq6212 179 6e-43 >seq6123 Length=898 Score = 228 bits (252), Expect = 1e-57 Identities = 215/276 (78%), Gaps = 20/276 (7%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || || |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 501 CTCGTTGAATCGATCAGTGTAGCGCGCGTGCGGCCCAGATTATCTAAGGGCATCACAGAC 442 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG------- 115 |||| ||||||||||| ||| | | || | ||||||||||||||| Sbjct 441 CTGTATTTGCCTCAAACCTCCGCAGTATTGACTACCGCAGTCCCTCTAAGAAGTTGTCTG 382 Query 116 ---------CCAGCCACC---AACCATAGTCGATGGGG-CTATTTAGCAGGTTAAGGTCT 162 || |||| ||| | || ||| ||||||||||||||||||||| Sbjct 381 GCCCGAAGGCCTCGCACCGTGAACAAGCCACGGTGGCAACTATTTAGCAGGTTAAGGTCT 322 Query 163 CGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCA 222 |||||||||||| |||||| |||||| | || ||||||||||||| |||||||||||||| Sbjct 321 CGTTCGTTATCGCAATTAAGCAGACAGACCAATCCACCAACTAAGTACGGCCATGCACCA 262 Query 223 CCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||| || |||||||||| Sbjct 261 CCACCCATAGAATCAAGAAAGAACTCTCAATCTGTC 226 >seq6212 Length=42043 Score = 179 bits (198), Expect = 6e-43 Identities = 206/276 (75%), Gaps = 27/276 (10%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || || |||||| ||||||||||||||||||| |||||||||||||||| | Sbjct 25335 CTCGTTGAATCGATCAGTGCAGCGCGCGTGCGGCCCAGATTATCTAAGGGCATCACATAT 25276 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG------- 115 ||||||||||| ||| | | || | | ||||||||||||| Sbjct 25275 ------TTGCCTCAAACCTCCGCAGTATTGACTACCGCA-TCCCTCTAAGAAGTTGTCTG 25223 Query 116 ---CCA--GCCACCAACCAT-----AGTCGATGGGGC---TATTTAGCAGGTTAAGGTCT 162 | | ||| | ||| | || | | ||| |||||||||||| ||||||| Sbjct 25222 GCCCGAAGGCCTCGCACCGTGAACAAGCCACAGTGGCAACTATTTAGCAGGTAAAGGTCT 25163 Query 163 CGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCA 222 |||||||||||| || ||| |||||| | || ||||||||||||| |||||||||||||| Sbjct 25162 CGTTCGTTATCGCAAATAAGCAGACAGACCAATCCACCAACTAAGTACGGCCATGCACCA 25103 Query 223 CCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||| || |||||||||| Sbjct 25102 CCACCCATAGAATCAAGAAAGAACTCTCAATCTGTC 25067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796709479287