Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq66 342 9e-92 seq10242 111 3e-22 >seq66 Length=872 Score = 342 bits (378), Expect = 9e-92 Identities = 246/279 (88%), Gaps = 11/279 (4%) Strand=Plus/Plus Query 25 CGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACG 83 || ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 478 CGGCGGTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACG 537 Query 84 TTCCCTATT-AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGA 142 |||||| || ||| ||||||||||| || ||| |||||||||||||| | ||||||| Sbjct 538 TTCCCTTTTGAGT-GGTGAACAATCACACCCTTCACGAATTCTGCTTCGTGAGGATAGGA 596 Query 143 AGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCC 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 597 AGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCC 656 Query 203 AGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA-TTTCGA-------GGGA 254 ||||||||||||||||||||||||| |||||||||| | ||| |||| | | Sbjct 657 AGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTGAAACTTTCAATAAAACGGTCG 716 Query 255 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||||||||||||||||| |||||| |||||||||| Sbjct 717 CTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 755 >seq10242 Length=7429 Score = 111 bits (122), Expect = 3e-22 Identities = 78/85 (92%), Gaps = 3/85 (4%) Strand=Plus/Minus Query 25 CGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACG 83 || ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 4092 CGGCGGTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACG 4033 Query 84 TTCCCTATT-AGTGGGTGAACAATC 107 |||||| || ||| ||||| ||||| Sbjct 4032 TTCCCTTTTGAGT-GGTGAGCAATC 4009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854299804512