Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq7619 134 3e-29 seq10576 86.0 1e-14 >seq7619 Length=280 Score = 134 bits (148), Expect = 3e-29 Identities = 168/228 (74%), Gaps = 12/228 (5%) Strand=Plus/Plus Query 83 CCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTAT 142 ||| |||||||| ||| |||||||| ||||||| |||||||| |||||| || |||| Sbjct 2 CCAGTGTGGCCGATCACCCTCTCAGGTCGGCTACTGATCGTCGCCTTGGTAAGCCATTAC 61 Query 143 CTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTTTG---GTCAA 199 || |||||||| |||||| | |||| | ||||| | ||||||||||||| ||| Sbjct 62 CTTACCAACTAGCTAATCAGACGCGGGTCCATCCCATACCGATAAATCTTTGACATTCA- 120 Query 200 AGAATGATGCCATCC---TCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATT 256 ||| |||| || | | || |||| ||||||| |||||||||| | ||| Sbjct 121 --AATCATGCGATTCAAATGTG---TTATCAGGTATTAATCATCGTTTCCAATGGCTATC 175 Query 257 CCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || | | |||||||| | |||| |||||||||||||||||| || Sbjct 176 CCTGTGTATGGGGCAGGTTACCCACGCGTTACTCACCCGTCCGCCGCT 223 >seq10576 Length=1507 Score = 86.0 bits (94), Expect = 1e-14 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 223 TATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACG 282 |||| ||||||||| |||||||||||| ||||| || |||| |||||| ||| | | Sbjct 1390 TATGGGGTATTAGCATTCGTTTCCAAATGTTATCCCCCTCTTGAAGGCACGTTACCTATA 1331 Query 283 TGTTACTCACCCGTCCGCCACTAAGCT 309 | |||||||||||| ||||||| |||| Sbjct 1330 TATTACTCACCCGTGCGCCACTTAGCT 1304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998282917632