Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq643 167 4e-39 >seq643 Length=247 Score = 167 bits (184), Expect = 4e-39 Identities = 176/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||||| |||||||||||| | ||||| | ||||||||| | ||| | Sbjct 236 CCCACGCTTTCGCGTCTCAGCGTCAGTAATGTTCCAGTAGATCGCCTTCGCAATCGGTAT 177 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | || |||||| |||| ||| |||||| | |||||| | ||||||| || Sbjct 176 TCCTTCTGATCTCTACGGATTTTACCCCTACACCAGAAATTCCATCTACCTCTCCCATAC 117 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || | ||||||||||||||| | ||||||||| | | |||||||||||||| Sbjct 116 TCTAGGTTATCAGTTTCAAATGCAGTTCAATGGTTGAGCCATTGGCTTTCACATCTGACT 57 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGC 232 | ||||||||||||| |||||| |||| | | |||| |||||||||| Sbjct 56 TAATAACCCGCCTACACGCTCTTTACGCCCAGTGATTCCGAGTAACGCTTGC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828705843917