Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq10576 104 6e-20 seq7619 93.3 1e-16 >seq10576 Length=1507 Score = 104 bits (114), Expect = 6e-20 Identities = 123/164 (75%), Gaps = 7/164 (4%) Strand=Plus/Minus Query 256 TATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA-GTTTCCCAGA 314 |||| ||||||||| |||||||| |||||||||||| ||||| ||| || | | Sbjct 1390 TATGGGGTATTAGCATTCGTTTCCAAATGTTATCCCCCTCTTGAAGGCACGTTACCTATA 1331 Query 315 CATTACTCACCCGTCCGCCACTC----GTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCG 370 ||||||||||||| ||||||| | ||| | || || || || ||| || Sbjct 1330 TATTACTCACCCGTGCGCCACTTAGCTGACAGTTAT--AGTAAACTATAACCCGTTCTCG 1273 Query 371 TTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||||||| || |||||||||||||| |||||| Sbjct 1272 TTCGACTTGCATGTGTTAAGCACGCCGCCAGCGTTCACTCTGAG 1229 >seq7619 Length=280 Score = 93.3 bits (102), Expect = 1e-16 Identities = 158/229 (69%), Gaps = 15/229 (7%) Strand=Plus/Plus Query 117 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTA 176 ||||||||||| | ||| |||||||| | |||| ||||||||||| ||| ||||||| Sbjct 1 TCCAGTGTGGCCGATCACCCTCTCAGGTCGGCTACTGATCGTCGCCTTGGTAAGCCATTA 60 Query 177 CCCCGCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCC 236 || |||||||||||||| | |||| ||||| ||| || | || | Sbjct 61 CCTTACCAACTAGCTAATCAGACGCGGGTCCATCCCATACCGATA------AATCTTTGA 114 Query 237 CTCTTTGGTCTTGCGA--------CGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTAT 288 | | || ||||| ||||| ||||||| || |||||||| ||| ||| Sbjct 115 CATTCAAATCATGCGATTCAAATGTGTTATCAGGTATTAATCATCGTTTCCAATGGCTAT 174 Query 289 CCCCCTCCATCAGGCA-GTTTCCCAGACATTACTCACCCGTCCGCCACT 336 ||| | || |||| ||| |||| | ||||||||||||||||| || Sbjct 175 CCCTGTGTATGGGGCAGGTTACCCACGCGTTACTCACCCGTCCGCCGCT 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222256649152