Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq7619 235 2e-59 >seq7619 Length=280 Score = 235 bits (260), Expect = 2e-59 Identities = 188/224 (84%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82 |||||||||||||||||||||||||||||||||||||| |||||| ||||| | | Sbjct 223 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCCATACACAGGGATAGCCATTGG 164 Query 83 AAAGGTATGCT-AATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTCC 141 ||| | ||| | ||||| ||||| | | || |||||||| | | | |||||| | Sbjct 163 AAACG-ATGATTAATACCTGATAACACATTTGAATCGCATGATTTGAATGTCAAAGATTT 105 Query 142 GGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGG 201 ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 104 ATCGGTATGGGATGGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAATGGCTTACCAAGG 45 Query 202 CGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGA 245 ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 44 CGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACACTGGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497424376448