Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq3864 120 6e-25 seq780 118 2e-24 seq6075 102 1e-19 >seq3864 Length=792 Score = 120 bits (132), Expect = 6e-25 Identities = 168/231 (73%), Gaps = 11/231 (5%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||||||| ||| | | ||||||||||||||||| ||| ||||||||||| | Sbjct 474 ATGGTGGATGCCTAGGCTGTAAGAGGCGATGAAGGACGTACTAGACTGCGATAAGCTTTG 415 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 ||||| | || | | ||||||| ||||||||||||||| ||||| | | | | Sbjct 414 GGGAG-CCGTCAAGAGGCATTGATCCAGAGATTTCCGAATGGGACAACCCAG--CATAGA 358 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAG 187 || | | ||| ||| || | || ||| |||||| |||||||||| || Sbjct 357 GTGA-TCTATG----TTAC---CCTACGGGGGGCTAACCTGGCGAAGTGAAACATCTCAG 306 Query 188 TAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 |||| ||||| ||||||||| |||||||| ||||| |||||||||| Sbjct 305 TAGCCAGAGGAAGAGAAATCAAACGAGATTCTGCTAGTAGCGGCGAGCGAA 255 >seq780 Length=916 Score = 118 bits (130), Expect = 2e-24 Identities = 169/236 (72%), Gaps = 8/236 (3%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||| ||| | | || ||||||||||||| ||| ||||| ||| || | Sbjct 430 GGTGGATGCCTAGGCACTGAGAGCCGATGAAGGACGTGGTAAGCTGCGAAAAGTCACGAG 489 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTT----T 125 ||| |||| || ||||||| || || ||||||||||| ||||| || || | Sbjct 490 GAGCT-GCAAGCAAGCTTTGATTCGTGAATGTCCGAATGGGGGAACCCAGCTGTTGTAAT 548 Query 126 GGG---TCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACAT 182 | | | | ||| ||||||||||| | | || ||| | | |||||||||||| Sbjct 549 GAGCAGTTACTGCTAAGTGAATACATAGCTTAGTGGAGGTAACCCAGGGAACTGAAACAT 608 Query 183 CTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 ||||||| ||| ||||| ||||| || |||| || |||||| |||||||||| Sbjct 609 CTAAGTACCTGGAGGAAGAGAAAGAAATATCGATTTCCTAAGTAGCGGCGAGCGAA 664 >seq6075 Length=994 Score = 102 bits (112), Expect = 1e-19 Identities = 164/231 (71%), Gaps = 11/231 (5%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||||||| | | | | ||||||||||||||||| ||| ||||||||| | Sbjct 858 ATGGTGGATGCCTAGACTGTAAGAGGCGATGAAGGACGTACTAGACTGCGATAAGTCTTG 799 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 ||||| | || | ||||||||| ||||||||||||| ||||| || || Sbjct 798 GGGAG-CTGTCAAGAAGCTTTGATCCAGGAATTTCCGAATGGGACAACCCAGCATGATGC 740 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAG 187 | | | |||| | || ||| || ||| ||| ||| |||||||||| || Sbjct 739 G--AGT-CATGTTACCCGCA-AGG------GGGCAAACCCGGTGAAGTGAAACATCTCAG 690 Query 188 TAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 || | | ||||| ||||||||| |||||||| ||||| |||||||||| Sbjct 689 TAACCGGAGGAAGAGAAATCAAATGAGATTCCGTTAGTAGCGGCGAGCGAA 639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918292299232