Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq17 414 3e-113 >seq17 Length=542 Score = 414 bits (458), Expect = 3e-113 Identities = 383/476 (80%), Gaps = 16/476 (3%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 || || | || |||||||| || | | |||||||||||||||||||||||||||||| Sbjct 58 TAGTTTTCGTTACTACCTCGTCGAATTGACATTGGGTAATTTGCGCGCCTGCTGCCTTCC 117 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAA-TCGAACCCTAATTCCCCGTT 161 ||||| ||||| ||||||||| |||| ||||||||| | | || |||||| ||||||| Sbjct 118 TTGGAAGTGGTCGCCGTTTCTAAGGCGTCCTCTCCGGGAGTAGAGCCCTAACCCCCCGTT 177 Query 162 ACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTT 221 ||||||| ||||||| | |||||| | |||||||||||||||||||||||||||| Sbjct 178 ACCCGTTACAACCATGGATGTCCACTACACATCCATCGAAAGTTGATAGGGCAGAAATTT 237 Query 222 GAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGG 281 || || || | ||||| |||||||||||| |||| | ||||| ||||||||||||| | Sbjct 238 GATCGACGCACCACCGGCACAAGGCCATGCGGTTCGCTCAGTTACTATGAATCACCAAAG 297 Query 282 AGCCCCGAAGGGC-------GTTGGTTTTTTATCTAATAAATACACCCCTTC--CGA-AG 331 ||| || || ||||||||| ||||||||||| || |||||| ||| || Sbjct 298 -GCCGGAAATTGCTTCCCAGGTTGGTTTTGTATCTAATAAACGCAGCCCTTCCACGAGAG 356 Query 332 TCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG-TAAGGT- 389 || ||| || ||||||||||||||||||| || ||||||||||||| |||| ||||| Sbjct 357 TC-GGGCCTTAAGCATGTATTAGCTCTAGATTTTCCACGGTTATCCAAGTAGAAAAGGTC 415 Query 390 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTG 448 | |||| | ||||||||||||||||||| ||||||||||||||||| ||||| | || Sbjct 416 ATTATCGAGTAAACGATAACTGATTTAAGGAGCCATTCGCAGTTTCGTAGTATAAAGTTC 475 Query 449 CTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| ||| | | |||||||| | |||||||| Sbjct 476 CTTATACTTAGACATGCATGGCTTAGTCTGTTAAGTAAGCATATCGCGACTGGCAG 531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510222875392