Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq211 208 2e-51 >seq211 Length=45189 Score = 208 bits (230), Expect = 2e-51 Identities = 214/278 (77%), Gaps = 15/278 (5%) Strand=Plus/Plus Query 6 ATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGC 65 |||| | |||||||||| | || | |||||||||||||| | ||||||||||| | Sbjct 23745 ATACTCCGCATCTTCACGGAGAATGCAATTTCACTGAGTTATTGTTGGAGACAGCGGAGA 23804 Query 66 CATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 125 ||||||| ||| || |||||| ||||||||||||| ||||||||||||||||||| || Sbjct 23805 AGTCGTTACACCACTCATGCAGGACGGAACTTACCCGTCAAGGAATTTCGCTACCTTTGG 23864 Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAA 185 |||||||| ||||| |||||||||||| |||| ||| | | ||||||| Sbjct 23865 ACCGTTATGGTTACAGCCGCCGTTTACTGGGG----GATATATA-------GTTAGCTCT 23913 Query 186 CCCCA--TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT--TT 241 | ||| | | ||| |||||| | |||||||||| |||| ||||||||| || || | Sbjct 23914 CACCAACTAATTTAGCCTTCCAGAACCGGGCAGGTGTCATACCCTATACTTCATCTGATA 23973 Query 242 CGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 | || ||||||| |||||||||| ||||||||||| Sbjct 23974 AGATTTAGCAGAGTATTGTGTTTTTAGTAAACAGTCGC 24011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260797301888