Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq214 104 7e-20 >seq214 Length=10845 Score = 104 bits (114), Expect = 7e-20 Identities = 144/198 (73%), Gaps = 13/198 (7%) Strand=Plus/Minus Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGG--- 353 ||| |||| ||| || ||||| ||| ||| | |||||||| ||||||||||||||| Sbjct 5033 GGATGACGCCAAGTCCTCATGGCCCATATAAACTGGGCTACTCACGTGCTACAATGGCCT 4974 Query 354 ---ACAATACAAAGGGCAGCGAAAC--CGCGAGGTCAAGCAAATCCCATAAAGTTGTTCT 408 |||||| || | | | | | | | || |||||||||| |||| ||| || Sbjct 4973 AAAACAATAAGAATGCTACCTACATAACACTAGT--AAGCAAATCC--TAAATTTGGCCT 4918 Query 409 CAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGA 468 ||||||||||| | | || || | | | | ||| ||||||||||||||||||| || Sbjct 4917 AAGTTCGGATTGGACTTTGAAAATA-AGTCCACCAAGATGGAATCGCTAGTAATCGTGGA 4859 Query 469 TCAGCATGCTACGGTGAA 486 ||| ||||| |||||||| Sbjct 4858 TCATCATGCCACGGTGAA 4841 Score = 93.3 bits (102), Expect = 1e-16 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| ||||||| ||||||| ||||||| |||||||||| | | |||||||||||| Sbjct 5398 TACGGTCGCAAGGCTGAAACTTAAAGGAAGTGACGGGGACTGATATACGCGGTGGAGCAT 5339 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGA 104 ||||| |||||||| | ||||| |||||||||| | |||| Sbjct 5338 GTGGTATAATTCGATACTCCGCGATAAACCTTACCAGTTTTTGA 5295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503996781440