Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq8 176 8e-42 seq211 87.8 3e-15 >seq8 Length=1859391 Score = 176 bits (194), Expect = 8e-42 Identities = 120/134 (90%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 12 ATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTA 70 ||||||| |||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct 1854400 ATTACCACACCGGCGACTCCTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTA 1854341 Query 71 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 1854340 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTGGCGAATTCTGCTTC 1854281 Query 131 GGTATGATAGGAAG 144 | | ||||||||| Sbjct 1854280 GCAAGGATAGGAAG 1854267 >seq211 Length=45189 Score = 87.8 bits (96), Expect = 3e-15 Identities = 125/175 (71%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||||||| || ||| | || ||||| | ||| Sbjct 23224 CTGTCTCACGACGTTCTAAACCCAGCTCACGTACCACTTTAATTGGCGAACAGCCAAACC 23283 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| ||| ||| | | ||| || ||||||||||||| | |||| | Sbjct 23284 CTTGGAACCTCCTTCAGCTCC---AGGATGTGATGAGCCGACATCGAGGTGCCAAACGAC 23340 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||| | ||||| | || |||| ||||||||| ||| ||||| Sbjct 23341 TCCGTCGATATGAGCTCTTGGGAGTCATCAGCCTGTTATCCCTAGAGTATCTTTT 23395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854398171584