Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq211 141 2e-31 >seq211 Length=45189 Score = 141 bits (156), Expect = 2e-31 Identities = 258/360 (72%), Gaps = 21/360 (6%) Strand=Plus/Plus Query 45 GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104 ||||| ||||||| || | | || |||||||| |||| || |||||| |||||| | Sbjct 24925 GGTTCAGTCCTCCTTTTGG-ATTTCTCCAACCTT-CAACTTGTCCATAGT-TAGATCACT 24981 Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACG 164 ||||| |||||||| || | |||| |||| | ||| ||||||||| | ||| | Sbjct 24982 TGGTTT-CGGGTCTAATTTATATA-ACTA-ACGCAATT-TAATACTCGCTTT-CACTAGG 25036 Query 165 CCTCCC-CTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAA 223 ||| | ||| |||||||| || | ||| ||| | ||||||||||||| ||||| Sbjct 25037 CCTACATCTAACGATTTAAGCTT-GCTATATAAATTAACTTGCTGACCCATTATGCAAAA 25095 Query 224 GGTACGCAGTCACCCAACAAAGTGGGCTCCCA-CTGCTTGTACGCATACGGTTTCAGGAT 282 |||||| | || | ||| | || || |||||| | | | |||||||| | Sbjct 25096 GGTACGTTGAAACTATAAAAAAAG---TCACAACTGCTTAATCACTTTTAGTTTCAGGTT 25152 Query 283 CTATTTCACTCCCCTCT-----CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTC 337 ||||||||| ||| || | |||| |||||| ||||||||||||||||||||| Sbjct 25153 CTATTTCACCCCCTTCCATCTACATGGGTACTTTTCATATTTCCCTCACGGTACTAGTTC 25212 Query 338 ACTATCGGTC-AGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAA 396 |||||||||| | | ||| || |||| ||| || | |||||| || ||||||| |||| Sbjct 25213 ACTATCGGTCTAATATGTA-TACTTAGGCTTAGAAGGTGGTCCTCCTATATTCAAGCAAA 25271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241597342976