Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq214 113 1e-22 >seq214 Length=10845 Score = 113 bits (124), Expect = 1e-22 Identities = 226/330 (68%), Gaps = 14/330 (4%) Strand=Plus/Minus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 |||||| |||||||| ||||| |||| |||||| || |||| |||| | || ||| Sbjct 6025 GATTAGGTAGTTGGTGGGGTAATGGCTCACCAAGCCGGGGATCTTTAGCTGGTTTGTGAG 5966 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | | |||||| ||| ||||| | ||| | | | | ||||||||||||| Sbjct 5965 AACGTACAGCCACAGTGGGGGTGAGAAGAGACCCACCTTTCAATTGAAGGCAGCAGTGGG 5906 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||| ||| |||||| | || | |||| |||| | || ||| |||||| ||| Sbjct 5905 GAATCTTGGACAATGAGGGTAACCTTGATCCAGCGATATCGAGTGGAGTATGAAGAGCTT 5846 Query 347 CGGGTCGTAA------AGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAG 400 | || ||| | | | || | ||||||| |||| || || ||| Sbjct 5845 AGCTAGACAACTCCGGAGCCGTATTTTTAATAATGATAATG---GTACG-GATGA--AAG 5792 Query 401 CCCCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGA 459 |||||| || | | ||||||||||||||||||| | | ||||| |||||| | |||| Sbjct 5791 TCCCGGCAAATATCCATGCCAGCAGCCGCGGTAATTTGGATGGGGCGAGCGTTTTTCGGA 5732 Query 460 ATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 |||||| |||| ||||||||||||||| || Sbjct 5731 ATTACT-GGGCATAAAGGGTGCGTAGGCGG 5703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497596795136