Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq211 203 1e-49 >seq211 Length=45189 Score = 203 bits (224), Expect = 1e-49 Identities = 324/457 (71%), Gaps = 21/457 (5%) Strand=Plus/Minus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92 ||||||||||||||||||||||| | |||| || | ||||||| | || | || Sbjct 24995 TAGACCCGAAACCAAGTGATCTAACTATGGACAAGTTGAAGGTTGGAGAAATCCAAAAGG 24936 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||| | ||||||| |||||| ||||| ||||||| |||| | |||||||||||||| Sbjct 24935 AGGACTGAACCCAAATATGTTGCAAAATATTGGGATGATCTGTTGTTAGGGGTGAAAGGC 24876 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGG--TAGTGCCTCAAGT 210 ||| ||||||||||||||||||||| ||| ||||| |||||||| ||||| | || Sbjct 24875 TAATCAAACTTGGAAATAGCTGGTTTTCTGCGAAATATATTTAGGTATAGTGTTATACGT 24816 Query 211 ATCACCATCGGGGGTAGAGCACTG-----TTATGGCTAGGGGGTCATTGCGACTTACCAA 265 | | | | ||||||| ||||||| |||||| || | || | ||| | Sbjct 24815 -TAATCTTTGGGGGTAAAGCACTGCAAATTTATGGGTA---ACTAAT---GTTATACTAT 24763 Query 266 ACCATTGCAAACTCCGAATGCGCATCA--GTTTTACCGCGGGAGTGAGGGCATGGGTGCT 323 | | | |||||| |||| | | | ||||| | | | || ||||||||| Sbjct 24762 ATTTTAGTAAACTCTGAATACCAAAGAATATTTTATAAC---AATCAGACTATGGGTGCT 24706 Query 324 AAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGC 383 ||||||| | | ||||| ||| | || ||| | | ||||| ||| |||| | | Sbjct 24705 AAGGTCCATAGTCAAGAGGGGAACAGCCCAGACCACAAATTAAGGACCCAAAATAAATAC 24646 Query 384 TAAGTTAAACTAACGAAGTCTGAT-TGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGC 442 ||||| | ||| |||||| || | | |||| | | |||| || |||||||||||||| Sbjct 24645 TAAGTGCTATTAAGGAAGTCATATATACGAAGATATCCAGGAGGTGGGCTTGGAAGCAGC 24586 Query 443 CATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGA 479 || || |||||||| ||||||||||||||| || || Sbjct 24585 CA-TCCTTTAAAGAAAGCGTAACAGCTCACTGGTTGA 24550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689596384256