Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 1e-14 seq7 89.7 2e-12 >seq1 Length=4772237 Score = 96.9 bits (106), Expect = 1e-14 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 349071 TGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGC 349130 |||| | || || ||||||| | |||| || |||||||||||| ||| || || | Sbjct 4251987 TGGCATTGATGATTTCCTTGATGCGCGGCACACCGAGGGTCACGTTCATGGAGGCCACAC 4252046 Query 349131 CGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 ||||||||||||| |||| ||||||| ||||||| |||||| |||||| ||||| Sbjct 4252047 CGGCAAAGTGGAAAGTCTTCAGGGTCATCTGCGTGCCGGGCTCACCGATGGACTGG 4252102 >seq7 Length=2157034 Score = 89.7 bits (98), Expect = 2e-12 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 448984 GGCCTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGAT 449043 || ||||| | ||| || |||||| ||||| ||| |||||| ||||| |||||||| Sbjct 1862084 GGTCTCGATAAGCATACCGATGGTCATACGCGAGGGGAAGGCATTGGGGTTGATGATGAT 1862143 Query 449044 GTCGGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT 449103 || |||||| ||| | || |||||||||||||| ||| | | | | | | Sbjct 1862144 ATCCGGCGTCATGCCATACTCGGTGAAGGGCATGTCCGCGGTGGGGTAAATCCGCGAGCA 1862203 Query 449104 GACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142 ||| |||||||| |||||||| | |||||||||| || Sbjct 1862204 GACACCCTTCTGCCCGTGGCGCGAGGAGAACTTGTCACC 1862242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084733344488772