Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq3 113 6e-20 >seq3 Length=3619281 Score = 113 bits (124), Expect = 6e-20 Identities = 255/381 (67%), Gaps = 2/381 (1%) Strand=Plus/Minus Query 162455 TCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAGAAA 162514 ||||||| || |||| ||||| || || | |||| ||||| |||||| || | Sbjct 2746675 TCTACCAGGCCTCCACCTCGGAGCTCTACGGCCAGGTTCGGGAGATCCCCCAGTCCGAGA 2746616 Query 162515 CCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCA 162574 || || | || || || || || || || || || || || || ||||||||||| Sbjct 2746615 AGACCCCTTTCTACCCGCGGTCGCCGTACGGCGTGGCCAAGCTGTACGGGTTCTGGATTG 2746556 Query 162575 TCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACG 162634 | || |||||| | || ||| | ||| |||||| | || || || ||||| || | Sbjct 2746555 TGAAGAACTACCGCGAGGCCTACGGCATGTATGCCTGCAATGGCATCCTCTTCAACCATG 2746496 Query 162635 AAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCCGAA 162694 | ||| | || | || || |||||||| || |||||| ||| ||| || ||| || Sbjct 2746495 AGAGCCCCCGGCGTGGGTTTACCTTCGTCACCCGGAAGATCAGCCGCGCCGTGGCCCAAA 2746436 Query 162695 T-TAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGG 162753 | | ||| | |||| || || || ||||| || |||| || || ||| Sbjct 2746435 TCCACCTTGGCCAGCTGGAGTG-CCTGAGCCTGGGCAACCTGAACGCCCTGCGCGATTGG 2746377 Query 162754 GGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGAT 162813 || ||||| |||||||| |||| |||||| ||||||| ||| || ||||| || Sbjct 2746376 GGCCACGCTCGTGACTACGTCGAGGGCATGTGGCTGATGCTCCAGAGCGACAAGCCGGAG 2746317 Query 162814 GATTATGTGATCGCAACTGGT 162834 || ||||| | || || ||| Sbjct 2746316 GACTATGTTCTGGCCACCGGT 2746296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691457350346640