Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq206 111 3e-22 seq101 111 3e-22 seq41 111 3e-22 seq19 111 3e-22 seq13 111 3e-22 seq4 111 3e-22 >seq206 Length=5412 Score = 111 bits (122), Expect = 3e-22 Identities = 107/135 (79%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 185 AATG-ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||| || ||||||| |||| |||| | |||||| | ||||||||||||||||||| Sbjct 1516 AATGCATCAATAGGGGTAGTTGGGGCCATTTGTATTCCCTAGTCAGAGGTGAAATTCTTG 1457 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||||| | |||||| ||| |||||||||||| ||||||| || |||| |||| | Sbjct 1456 GATTTTTGGAAGACGAACAGTTGCGAAAGCGTTTGGCAAGGATATTCCCATTGATCA-AG 1398 Query 304 AACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 1397 GACGAAAGTTAGGGG 1383 >seq101 Length=10288 Score = 111 bits (122), Expect = 3e-22 Identities = 107/135 (79%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 185 AATG-ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||| || ||||||| |||| |||| | |||||| | ||||||||||||||||||| Sbjct 5346 AATGCATCAATAGGGGTAGTTGGGGCCATTTGTATTCCCTAGTCAGAGGTGAAATTCTTG 5287 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||||| | |||||| ||| |||||||||||| ||||||| || |||| |||| | Sbjct 5286 GATTTTTGGAAGACGAACAGTTGCGAAAGCGTTTGGCAAGGATATTCCCATTGATCA-AG 5228 Query 304 AACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 5227 GACGAAAGTTAGGGG 5213 >seq41 Length=149690 Score = 111 bits (122), Expect = 3e-22 Identities = 107/135 (79%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 185 AATG-ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||| || ||||||| |||| |||| | |||||| | ||||||||||||||||||| Sbjct 9110 AATGCATCAATAGGGGTAGTTGGGGCCATTTGTATTCCCTAGTCAGAGGTGAAATTCTTG 9051 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||||| | |||||| ||| |||||||||||| ||||||| || |||| |||| | Sbjct 9050 GATTTTTGGAAGACGAACAGTTGCGAAAGCGTTTGGCAAGGATATTCCCATTGATCA-AG 8992 Query 304 AACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 8991 GACGAAAGTTAGGGG 8977 >seq19 Length=190679 Score = 111 bits (122), Expect = 3e-22 Identities = 107/135 (79%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 185 AATG-ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||| || ||||||| |||| |||| | |||||| | ||||||||||||||||||| Sbjct 181047 AATGCATCAATAGGGGTAGTTGGGGCCATTTGTATTCCCTAGTCAGAGGTGAAATTCTTG 181106 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||||| | |||||| ||| |||||||||||| ||||||| || |||| |||| | Sbjct 181107 GATTTTTGGAAGACGAACAGTTGCGAAAGCGTTTGGCAAGGATATTCCCATTGATCA-AG 181165 Query 304 AACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 181166 GACGAAAGTTAGGGG 181180 >seq13 Length=208297 Score = 111 bits (122), Expect = 3e-22 Identities = 107/135 (79%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 185 AATG-ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||| || ||||||| |||| |||| | |||||| | ||||||||||||||||||| Sbjct 10435 AATGCATCAATAGGGGTAGTTGGGGCCATTTGTATTCCCTAGTCAGAGGTGAAATTCTTG 10376 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||||| | |||||| ||| |||||||||||| ||||||| || |||| |||| | Sbjct 10375 GATTTTTGGAAGACGAACAGTTGCGAAAGCGTTTGGCAAGGATATTCCCATTGATCA-AG 10317 Query 304 AACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 10316 GACGAAAGTTAGGGG 10302 >seq4 Length=289758 Score = 111 bits (122), Expect = 3e-22 Identities = 107/135 (79%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 185 AATG-ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||| || ||||||| |||| |||| | |||||| | ||||||||||||||||||| Sbjct 1036 AATGCATCAATAGGGGTAGTTGGGGCCATTTGTATTCCCTAGTCAGAGGTGAAATTCTTG 977 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||||| | |||||| ||| |||||||||||| ||||||| || |||| |||| | Sbjct 976 GATTTTTGGAAGACGAACAGTTGCGAAAGCGTTTGGCAAGGATATTCCCATTGATCA-AG 918 Query 304 AACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 917 GACGAAAGTTAGGGG 903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915196037184