Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq303 262 6e-68 seq206 262 6e-68 seq101 262 6e-68 seq41 262 6e-68 seq19 262 6e-68 seq13 262 6e-68 seq4 259 8e-67 >seq303 Length=3911 Score = 262 bits (290), Expect = 6e-68 Identities = 208/248 (84%), Gaps = 5/248 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||| Sbjct 554 TCAGTGTAGCCCGCGTGCAGCCCAGGACATCAAAGGGCATCACAGACCTGTTATTGCCTA 495 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAAC--CAT 130 |||||||||| | || | |||||| ||||||||||| | | | | || Sbjct 494 AAACTTCCATCCGTGAAAAACGAATAGTACCTCTAAGAAGTATATATCGTATATCTTCAA 435 Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | || ||| |||||||| |||||||||||||||| |||||||||||||||||| Sbjct 434 ATACAATATAACTAGTTAGCAGGAAAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAA 375 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 374 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGAAAGAGCTATC 315 Query 251 AATCTGTC 258 |||||||| Sbjct 314 AATCTGTC 307 >seq206 Length=5412 Score = 262 bits (290), Expect = 6e-68 Identities = 208/248 (84%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||| Sbjct 890 TCAGTGTAGCCCGCGTGCAGCCCAGGACATCAAAGGGCATCACAGACCTGTTATTGCCTA 949 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAAC--CAT 130 |||||||||| | || | |||||| ||||||||||| | | | | || Sbjct 950 AAACTTCCATCCGTGAAAAACGAATAGTACCTCTAAGAAGTATATATCGTATATCTTCAC 1009 Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | || ||| |||||||| |||||||||||||||| |||||||||||||||||| Sbjct 1010 ATACAATATAACTAGTTAGCAGGAAAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAA 1069 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1070 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGAAAGAGCTATC 1129 Query 251 AATCTGTC 258 |||||||| Sbjct 1130 AATCTGTC 1137 >seq101 Length=10288 Score = 262 bits (290), Expect = 6e-68 Identities = 208/248 (84%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||| Sbjct 4720 TCAGTGTAGCCCGCGTGCAGCCCAGGACATCAAAGGGCATCACAGACCTGTTATTGCCTA 4779 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAAC--CAT 130 |||||||||| | || | |||||| ||||||||||| | | | | || Sbjct 4780 AAACTTCCATCCGTGAAAAACGAATAGTACCTCTAAGAAGTATATATCGTATATCTTCAC 4839 Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | || ||| |||||||| |||||||||||||||| |||||||||||||||||| Sbjct 4840 ATACAATATAACTAGTTAGCAGGAAAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAA 4899 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 4900 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGAAAGAGCTATC 4959 Query 251 AATCTGTC 258 |||||||| Sbjct 4960 AATCTGTC 4967 >seq41 Length=149690 Score = 262 bits (290), Expect = 6e-68 Identities = 208/248 (84%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||| Sbjct 8484 TCAGTGTAGCCCGCGTGCAGCCCAGGACATCAAAGGGCATCACAGACCTGTTATTGCCTA 8543 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAAC--CAT 130 |||||||||| | || | |||||| ||||||||||| | | | | || Sbjct 8544 AAACTTCCATCCGTGAAAAACGAATAGTACCTCTAAGAAGTATATATCGTATATCTTCAA 8603 Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | || ||| |||||||| |||||||||||||||| |||||||||||||||||| Sbjct 8604 ATACAATATAACTAGTTAGCAGGAAAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAA 8663 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 8664 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGAAAGAGCTATC 8723 Query 251 AATCTGTC 258 |||||||| Sbjct 8724 AATCTGTC 8731 >seq19 Length=190679 Score = 262 bits (290), Expect = 6e-68 Identities = 208/248 (84%), Gaps = 5/248 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||| Sbjct 181673 TCAGTGTAGCCCGCGTGCAGCCCAGGACATCAAAGGGCATCACAGACCTGTTATTGCCTA 181614 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAAC--CAT 130 |||||||||| | || | |||||| ||||||||||| | | | | || Sbjct 181613 AAACTTCCATCCGTGAAAAACGAATAGTACCTCTAAGAAGTATATATCGTATATCTTCAC 181554 Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | || ||| |||||||| |||||||||||||||| |||||||||||||||||| Sbjct 181553 ATACAATATAACTAGTTAGCAGGAAAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAA 181494 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 181493 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGAAAGAGCTATC 181434 Query 251 AATCTGTC 258 |||||||| Sbjct 181433 AATCTGTC 181426 >seq13 Length=208297 Score = 262 bits (290), Expect = 6e-68 Identities = 208/248 (84%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||| Sbjct 9809 TCAGTGTAGCCCGCGTGCAGCCCAGGACATCAAAGGGCATCACAGACCTGTTATTGCCTA 9868 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAAC--CAT 130 |||||||||| | || | |||||| ||||||||||| | | | | || Sbjct 9869 AAACTTCCATCCGTGAAAAACGAATAGTACCTCTAAGAAGTATATATCGTATATCTTCAA 9928 Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | || ||| |||||||| |||||||||||||||| |||||||||||||||||| Sbjct 9929 ATACAATATAACTAGTTAGCAGGAAAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAA 9988 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 9989 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGAAAGAGCTATC 10048 Query 251 AATCTGTC 258 |||||||| Sbjct 10049 AATCTGTC 10056 >seq4 Length=289758 Score = 259 bits (286), Expect = 8e-67 Identities = 207/248 (83%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| ||||||| |||||| ||||| |||||||||||| |||||||||||||| Sbjct 410 TCAGTGTAGCCCGCGTGCAGCCCAGGACATCAAAGGGCATCACACACCTGTTATTGCCTA 469 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAAC--CAT 130 |||||||||| | || | |||||| ||||||||||| | | | | || Sbjct 470 AAACTTCCATCCGTGAAAAACGAATAGTACCTCTAAGAAGTATATATCGTATATCTTCAC 529 Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | || ||| |||||||| |||||||||||||||| |||||||||||||||||| Sbjct 530 ATACAATATAACTAGTTAGCAGGAAAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAA 589 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 590 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGAAAGAGCTATC 649 Query 251 AATCTGTC 258 |||||||| Sbjct 650 AATCTGTC 657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796796657673