Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq207 320 3e-85 seq101 320 3e-85 seq41 320 3e-85 seq19 320 3e-85 seq13 320 3e-85 seq135 241 2e-61 >seq207 Length=5364 Score = 320 bits (354), Expect = 3e-85 Identities = 232/266 (87%), Gaps = 3/266 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1286 TCAACAAAAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 1227 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||| Sbjct 1226 TTAGTGGGTGAACAATCCAACACTTGGTGAATGCTGCTTCACAATGATAGGAAGAGCCGA 1167 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1166 CATCGAAGGATCAAAAAGCAACGTCGCTAGGAACGCTTGGCTGCCACAAGCCAGTTATCC 1107 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTT--CGAGGGA-CTAAAGGATCGAT 267 ||||||||||||||||| |||||||| | || | | | | |||||||||||| Sbjct 1106 CTGTGGTAACTTTTCTGACACCTCTAAAAGGATATATACCTAAAAATTTAAAGGATCGAT 1047 Query 268 AGGCCACACTTTCATGGTTTGTATTC 293 |||||| |||||| |||| ||||| Sbjct 1046 AGGCCATGCTTTCACAGTTTCTATTC 1021 >seq101 Length=10288 Score = 320 bits (354), Expect = 3e-85 Identities = 232/266 (87%), Gaps = 3/266 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 95 TCAACAAAAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 154 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||| Sbjct 155 TTAGTGGGTGAACAATCCAACACTTGGTGAATGCTGCTTCACAATGATAGGAAGAGCCGA 214 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 215 CATCGAAGGATCAAAAAGCAACGTCGCTAGGAACGCTTGGCTGCCACAAGCCAGTTATCC 274 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTT--CGAGGGA-CTAAAGGATCGAT 267 ||||||||||||||||| |||||||| | || | | | | |||||||||||| Sbjct 275 CTGTGGTAACTTTTCTGACACCTCTAAAAGGATATATACCTAAAAATTTAAAGGATCGAT 334 Query 268 AGGCCACACTTTCATGGTTTGTATTC 293 |||||| |||||| |||| ||||| Sbjct 335 AGGCCATGCTTTCACAGTTTCTATTC 360 >seq41 Length=149690 Score = 320 bits (354), Expect = 3e-85 Identities = 232/266 (87%), Gaps = 3/266 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 3849 TCAACAAAAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 3908 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||| Sbjct 3909 TTAGTGGGTGAACAATCCAACACTTGGTGAATGCTGCTTCACAATGATAGGAAGAGCCGA 3968 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 3969 CATCGAAGGATCAAAAAGCAACGTCGCTAGGAACGCTTGGCTGCCACAAGCCAGTTATCC 4028 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTT--CGAGGGA-CTAAAGGATCGAT 267 ||||||||||||||||| |||||||| | || | | | | |||||||||||| Sbjct 4029 CTGTGGTAACTTTTCTGACACCTCTAAAAGGATATATACCTAAAAATTTAAAGGATCGAT 4088 Query 268 AGGCCACACTTTCATGGTTTGTATTC 293 |||||| |||||| |||| ||||| Sbjct 4089 AGGCCATGCTTTCACAGTTTCTATTC 4114 >seq19 Length=190679 Score = 320 bits (354), Expect = 3e-85 Identities = 232/266 (87%), Gaps = 3/266 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 186320 TCAACAAAAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 186261 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||| Sbjct 186260 TTAGTGGGTGAACAATCCAACACTTGGTGAATGCTGCTTCACAATGATAGGAAGAGCCGA 186201 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 186200 CATCGAAGGATCAAAAAGCAACGTCGCTAGGAACGCTTGGCTGCCACAAGCCAGTTATCC 186141 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTT--CGAGGGA-CTAAAGGATCGAT 267 ||||||||||||||||| |||||||| | || | | | | |||||||||||| Sbjct 186140 CTGTGGTAACTTTTCTGACACCTCTAAAAGGATATATACCTAAAAATTTAAAGGATCGAT 186081 Query 268 AGGCCACACTTTCATGGTTTGTATTC 293 |||||| |||||| |||| ||||| Sbjct 186080 AGGCCATGCTTTCACAGTTTCTATTC 186055 >seq13 Length=208297 Score = 320 bits (354), Expect = 3e-85 Identities = 232/266 (87%), Gaps = 3/266 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 5171 TCAACAAAAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 5230 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||| Sbjct 5231 TTAGTGGGTGAACAATCCAACACTTGGTGAATGCTGCTTCACAATGATAGGAAGAGCCGA 5290 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 5291 CATCGAAGGATCAAAAAGCAACGTCGCTAGGAACGCTTGGCTGCCACAAGCCAGTTATCC 5350 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTT--CGAGGGA-CTAAAGGATCGAT 267 ||||||||||||||||| |||||||| | || | | | | |||||||||||| Sbjct 5351 CTGTGGTAACTTTTCTGACACCTCTAAAAGGATATATACCTAAAAATTTAAAGGATCGAT 5410 Query 268 AGGCCACACTTTCATGGTTTGTATTC 293 |||||| |||||| |||| ||||| Sbjct 5411 AGGCCATGCTTTCACAGTTTCTATTC 5436 >seq135 Length=7699 Score = 241 bits (266), Expect = 2e-61 Identities = 153/166 (92%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 7402 TCAACAAAAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 7461 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||| Sbjct 7462 TTAGTGGGTGAACAATCCAACACTTGGTGAATGCTGCTTCACAATGATAGGAAGAGCCGA 7521 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 7522 CATCGAAGGATCAAAAAGCAACGTCGCTAGGAACGCTTGGCTGCCA 7567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854396300448