Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq101 87.8 4e-15 seq303 82.4 2e-13 seq41 82.4 2e-13 seq19 82.4 2e-13 seq13 82.4 2e-13 >seq101 Length=10288 Score = 87.8 bits (96), Expect = 4e-15 Identities = 83/105 (79%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | ||||| ||||| ||| || | | |||||| |||||||||||||| Sbjct 2859 ACGGTTTCAAGTACTATTGCACTCTCCTTTCAAAG-TCCTTTTCATCTTTCCCTCACGGT 2917 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGAT 374 ||| |||| ||||||||| || | |||||||||||||| ||| Sbjct 2918 ACTTGTTCGCTATCGGTCTCTCTTTCATATTTAGCCTTGGATGAT 2962 >seq303 Length=3911 Score = 82.4 bits (90), Expect = 2e-13 Identities = 82/105 (78%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | ||||| ||||| | | || | | |||||| |||||||||||||| Sbjct 2398 ACGGTTTCAAGTACTATTGCACTCTCTTTTCAAAG-TCCTTTTCATCTTTCCCTCACGGT 2340 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGAT 374 ||| |||| ||||||||| || | |||||||||||||| ||| Sbjct 2339 ACTTGTTCGCTATCGGTCTCTCTTTCATATTTAGCCTTGGATGAT 2295 >seq41 Length=149690 Score = 82.4 bits (90), Expect = 2e-13 Identities = 82/105 (78%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | ||||| ||||| ||| || | | |||| | |||||||||||||| Sbjct 6612 ACGGTTTCAAGTACTATTGCACTCTCCTTTCAAAG-TCCTTTCCATCTTTCCCTCACGGT 6670 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGAT 374 ||| |||| ||||||||| || | |||||||||||||| ||| Sbjct 6671 ACTTGTTCGCTATCGGTCTCTCTTTCATATTTAGCCTTGGATGAT 6715 >seq19 Length=190679 Score = 82.4 bits (90), Expect = 2e-13 Identities = 82/105 (78%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | ||||| ||||| | | || | | |||||| |||||||||||||| Sbjct 183554 ACGGTTTCAAGTACTATTGCACTCTCTTTTCAAAG-TCCTTTTCATCTTTCCCTCACGGT 183496 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGAT 374 ||| |||| ||||||||| || | |||||||||||||| ||| Sbjct 183495 ACTTGTTCGCTATCGGTCTCTCTTTCATATTTAGCCTTGGATGAT 183451 >seq13 Length=208297 Score = 82.4 bits (90), Expect = 2e-13 Identities = 82/105 (78%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | ||||| ||||| | |||| | | |||| | |||||||||||||| Sbjct 7934 ACGGTTTCAAGTACTATTGCACTCTCTTCTCAAAG-TCCTTTCCATCTTTCCCTCACGGT 7992 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGAT 374 ||| |||| ||||||||| || | |||||||||||||| ||| Sbjct 7993 ACTTGTTCGCTATCGGTCTCTCTTTCATATTTAGCCTTGGATGAT 8037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241594623872