Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq36 100 5e-19 >seq36 Length=158315 Score = 100 bits (110), Expect = 5e-19 Identities = 166/235 (71%), Gaps = 11/235 (5%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||||||| | | |||||||||| ||| | | ||| | ||| |||| Sbjct 36669 GGTGGATACCTTGGCATCCAGAAGCGATGAAGGGCGTGGCTACCAACGAAATGCTTCGGG 36610 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 ||| | || || |||||||||| || || ||||||| || ||| | ||| Sbjct 36609 GAGCTGG-AAGCAAGCTTTGATCCGGAGGTTCCCGAATGAGGCAACTC-----TTTAT-- 36558 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | || | ||||||| ||||||| ||| ||||||| | |||||||||||||| ||| Sbjct 36557 -ACTGTCTACTGAATATATAGGTAGACAAGAGCGAACTTAGTGAACTGAAACATCTTAGT 36499 Query 189 AGCTGCAGGAAAAGAAA-TCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGG 242 | || || | ||||| ||| | ||||||| ||||| ||||||||||| || Sbjct 36498 AACTAAAGAACGAGAAAGGCAAAAGCGATTCCCCTAGTAGCGGCGAGCGAAAAGG 36444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918396023328