Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4 282 1e-73 seq206 279 2e-72 seq101 279 2e-72 seq13 279 2e-72 seq41 275 2e-71 seq366 273 7e-71 seq19 273 7e-71 >seq4 Length=289758 Score = 282 bits (312), Expect = 1e-73 Identities = 345/470 (73%), Gaps = 18/470 (4%) Strand=Plus/Plus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 ||||||||||| ||||| ||||||||| ||||| |||||||||||||||||||||||||| Sbjct 1420 TATCAGTATTTCTTGTCGCTACCTCCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTG 1479 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156 || |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 1480 CCATCCTTGGATGTGGTAGCCATCTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 1539 Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 ||||||||||| | |||| |||||||| | |||||||| || ||||||||||||||||| Sbjct 1540 CCGTTACCCGTCAACACCACGGTAGGCCTCAATCCTACCGTCAAAAGTTGATAGGGCAGA 1599 Query 217 AATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCAC 276 ||| || | | || | || | | | || | || |||| |||| ||| Sbjct 1600 TATTCAAACAATGCGTCAATAGTAAAAAGACTATCAATCCACAAAATTATCATGATTCAA 1659 Query 277 CA------AGGAGCCCC--------GAAGGGCGT-TGGTTTTTTATCTAATAAATACACC 321 || | | ||| ||| | || || | ||||||| | || Sbjct 1660 CATTCAACACTAAACCCTGTGACAGGAAAAGTGTAAAGTAGGATCACTAATAAGTGCA-- 1717 Query 322 CCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT 381 |||| || || | ||||||||||||||||| ||||| | |||||||||| | Sbjct 1718 -ATTCCCAAAAATGGAAATAGGGCATGTATTAGCTCTAGCATTACTAGGGTTATCCATAT 1776 Query 382 AGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 | || || || || | ||||||| ||||||||||||||| |||| || | | Sbjct 1777 AACAAACTAACATTGTGTAGATTATAACTGTTTTAATGAGCCATTCACAGTCTCGCCATC 1836 Query 442 TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 | | ||||||||| | |||||||||||||| |||||||||||||| Sbjct 1837 CATGTGGCTTATACTGGCATTTGCATGGCTTAATCCTTGAGACAAGCATA 1886 >seq206 Length=5412 Score = 279 bits (308), Expect = 2e-72 Identities = 344/470 (73%), Gaps = 18/470 (4%) Strand=Plus/Plus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 ||||||||||| ||||| ||||||||| ||||| |||||||||||||||||||||||||| Sbjct 1900 TATCAGTATTTCTTGTCGCTACCTCCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTG 1959 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156 || |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 1960 CCATCCTTGGATGTGGTAGCCATCTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 2019 Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 ||||||||||| | |||| |||||||| | |||||||| || ||||||||||||||||| Sbjct 2020 CCGTTACCCGTCAACACCACGGTAGGCCTCAATCCTACCGTCAAAAGTTGATAGGGCAGA 2079 Query 217 AATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCAC 276 ||| || | | || | ||| | | || | || |||| |||| ||| Sbjct 2080 TATTCAAACAATGCGTCAATAGTACAAATACTATCAATCCACAAAATTATCATGATTCAA 2139 Query 277 CA------AGGAGCCCC--------GAAGGGCGT-TGGTTTTTTATCTAATAAATACACC 321 || | | ||| ||| | || || ||||||| | || Sbjct 2140 CATTCAACACTAAACCCTGTGACAGGAAAAGTGTAAAGTAGGACCACTAATAAGTGCA-- 2197 Query 322 CCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT 381 |||| || || | ||||||||||||||||| ||||| | |||||||||| | Sbjct 2198 -ATTCCCAAAAATGGAAATAGGGCATGTATTAGCTCTAGCATTACTAGGGTTATCCATAT 2256 Query 382 AGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 | || || || || | ||||||| ||||||||||||||| |||| || | | Sbjct 2257 AACAAACTAACATTGTGTAGATTATAACTGTTTTAATGAGCCATTCACAGTCTCGCCATC 2316 Query 442 TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 | | ||||||||| | |||||||||||||| |||||||||||||| Sbjct 2317 CATGTGGCTTATACTGGCATTTGCATGGCTTAATCCTTGAGACAAGCATA 2366 >seq101 Length=10288 Score = 279 bits (308), Expect = 2e-72 Identities = 344/470 (73%), Gaps = 18/470 (4%) Strand=Plus/Plus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 ||||||||||| ||||| ||||||||| ||||| |||||||||||||||||||||||||| Sbjct 5731 TATCAGTATTTCTTGTCGCTACCTCCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTG 5790 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156 || |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 5791 CCATCCTTGGATGTGGTAGCCATCTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 5850 Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 ||||||||||| | |||| |||||||| | |||||||| || ||||||||||||||||| Sbjct 5851 CCGTTACCCGTCAACACCACGGTAGGCCTCAATCCTACCGTCAAAAGTTGATAGGGCAGA 5910 Query 217 AATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCAC 276 ||| || | | || | ||| | | || | || |||| |||| ||| Sbjct 5911 TATTCAAACAATGCGTCAATAGTACAAATACTATCAATCCACAAAATTATCATGATTCAA 5970 Query 277 CA------AGGAGCCCC--------GAAGGGCGT-TGGTTTTTTATCTAATAAATACACC 321 || | | ||| ||| | || || ||||||| | || Sbjct 5971 CATTCAACACTAAACCCTGTGACAGGAAAAGTGTAAAGTAGGACCACTAATAAGTGCA-- 6028 Query 322 CCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT 381 |||| || || | ||||||||||||||||| ||||| | |||||||||| | Sbjct 6029 -ATTCCCAAAAATGGAAATAGGGCATGTATTAGCTCTAGCATTACTAGGGTTATCCATAT 6087 Query 382 AGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 | || || || || | ||||||| ||||||||||||||| |||| || | | Sbjct 6088 AACAAACTAACATTGTGTAGATTATAACTGTTTTAATGAGCCATTCACAGTCTCGCCATC 6147 Query 442 TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 | | ||||||||| | |||||||||||||| |||||||||||||| Sbjct 6148 CATGTGGCTTATACTGGCATTTGCATGGCTTAATCCTTGAGACAAGCATA 6197 >seq13 Length=208297 Score = 279 bits (308), Expect = 2e-72 Identities = 344/470 (73%), Gaps = 18/470 (4%) Strand=Plus/Plus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 ||||||||||| ||||| ||||||||| ||||| |||||||||||||||||||||||||| Sbjct 10819 TATCAGTATTTCTTGTCGCTACCTCCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTG 10878 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156 || |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 10879 CCATCCTTGGATGTGGTAGCCATCTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 10938 Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 ||||||||||| | |||| |||||||| | |||||||| || ||||||||||||||||| Sbjct 10939 CCGTTACCCGTCAACACCACGGTAGGCCTCAATCCTACCGTCAAAAGTTGATAGGGCAGA 10998 Query 217 AATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCAC 276 ||| || | | || | || | | | || | || |||| |||| ||| Sbjct 10999 TATTCAAACAATGCGTCAATAGTAAAAAGACTATCAATCCACAAAATTATCATGATTCAA 11058 Query 277 CA------AGGAGCCCC--------GAAGGGCGT-TGGTTTTTTATCTAATAAATACACC 321 || | | ||| ||| | || || ||||||| | || Sbjct 11059 CATTCAACACTAAACCCTGTGACAGGAAAAGTGTAAAGTAGGACCACTAATAAGTGCA-- 11116 Query 322 CCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT 381 |||| || || | ||||||||||||||||| ||||| | |||||||||| | Sbjct 11117 -ATTCCCAAAAATGGAAATAGGGCATGTATTAGCTCTAGCATTACTAGGGTTATCCATAT 11175 Query 382 AGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 | || || || || | ||||||| ||||||||||||||| |||| || | | Sbjct 11176 AACAAACTAACATTGTGTAGATTATAACTGTTTTAATGAGCCATTCACAGTCTCGCCATC 11235 Query 442 TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 | | ||||||||| | |||||||||||||| |||||||||||||| Sbjct 11236 CATGTGGCTTATACTGGCATTTGCATGGCTTAATCCTTGAGACAAGCATA 11285 >seq41 Length=149690 Score = 275 bits (304), Expect = 2e-71 Identities = 346/472 (73%), Gaps = 21/472 (4%) Strand=Plus/Plus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 ||||||||||| ||||| ||||||||| ||||| |||||||||||||||||||||||||| Sbjct 9494 TATCAGTATTTCTTGTCGCTACCTCCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTG 9553 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156 || |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 9554 CCATCCTTGGATGTGGTAGCCATCTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 9613 Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 ||||||||||| | |||| |||||||| | |||||||| || ||||||||||||||||| Sbjct 9614 CCGTTACCCGTCAACACCACGGTAGGCCTCAATCCTACCGTCAAAAGTTGATAGGGCAGA 9673 Query 217 AATTTGAATGAACCATCGCCGGCTCAAG--GCCATGCGATTCGTTAAGTTATTATGAATC 274 ||| || | | || | | | ||| | | | || | || |||| |||| || Sbjct 9674 TATTCAAACAATGCGTCAACAG-TAAAGAAGACTATCAATCCACAAAATTATCATGATTC 9732 Query 275 ACCA------AGGAGCCCC--------GAAGGGCGT-TGGTTTTTTATCTAATAAATACA 319 | || | | ||| ||| | || || ||||||| | || Sbjct 9733 AACATTCAACACTAAACCCTGTGACAGGAAAAGTGTAAAGTAGGACCACTAATAAGTGCA 9792 Query 320 CCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT 379 |||| || || | ||||||||||||||||| ||||| | |||||||||| Sbjct 9793 ---ATTCCCAAAAATGGAAATAGGGCATGTATTAGCTCTAGCATTACTAGGGTTATCCAT 9849 Query 380 GTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG 439 || || | || || | ||||||| ||||||||||||||| |||| || | Sbjct 9850 ATAACAAACAAACATTGTGTAGATTATAACTGTTTTAATGAGCCATTCACAGTCTCGCCA 9909 Query 440 TATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 | | | ||||||||| | |||||||||||||| |||||||||||||| Sbjct 9910 TCCATGTGGCTTATACTGGCATTTGCATGGCTTAATCCTTGAGACAAGCATA 9961 >seq366 Length=3055 Score = 273 bits (302), Expect = 7e-71 Identities = 343/470 (73%), Gaps = 18/470 (4%) Strand=Plus/Plus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 ||||||||||| ||||| ||||||||| ||||| |||||||||||||||||||||||||| Sbjct 265 TATCAGTATTTCTTGTCGCTACCTCCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTG 324 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156 || |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 325 CCATCCTTGGATGTGGTAGCCATCTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 384 Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 ||||||||||| | |||| |||||||| | |||||||| || ||||||||||||||||| Sbjct 385 CCGTTACCCGTCAACACCACGGTAGGCCTCAATCCTACCGTCAAAAGTTGATAGGGCAGA 444 Query 217 AATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCAC 276 ||| || | | || | ||| | | || | || |||| |||| ||| Sbjct 445 TATTCAAACAATGCGTCAATAGTACAAATACTATCAATCCACAAAATTATCATGATTCAA 504 Query 277 CA------AGGAGCCCC--------GAAGGGCGT-TGGTTTTTTATCTAATAAATACACC 321 || | | ||| ||| | || || | ||||||| | || Sbjct 505 CATTCAACACTAAACCCTGTGACAGGAAAAGTGTAAAGTAGGATCACTAATAAGTGCA-- 562 Query 322 CCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT 381 || | || || | ||||||||||||||||| ||||| | |||||||||| | Sbjct 563 -ATTTCCAAAAATGGAAATAGGGCATGTATTAGCTCTAGCATTACTAGGGTTATCCATAT 621 Query 382 AGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 | | || || || | ||||||| ||||||||||||||| |||| || | | Sbjct 622 AACATATTAACATTGTGTAGATTATAACTGTTTTAATGAGCCATTCACAGTCTCGCCATC 681 Query 442 TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 | | ||||||||| | |||||||||||||| |||||||||||||| Sbjct 682 CATGTGGCTTATACTGGCATTTGCATGGCTTAATCCTTGAGACAAGCATA 731 >seq19 Length=190679 Score = 273 bits (302), Expect = 7e-71 Identities = 343/470 (73%), Gaps = 18/470 (4%) Strand=Plus/Minus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 ||||||||||| ||||| ||||||||| ||||| |||||||||||||||||||||||||| Sbjct 180663 TATCAGTATTTCTTGTCGCTACCTCCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTG 180604 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156 || |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 180603 CCATCCTTGGATGTGGTAGCCATCTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 180544 Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 ||||||||||| | |||| |||||||| | |||||||| || ||||||||||||||||| Sbjct 180543 CCGTTACCCGTCAACACCACGGTAGGCCTCAATCCTACCGTCAAAAGTTGATAGGGCAGA 180484 Query 217 AATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCAC 276 ||| || | | || | ||| | | || | || |||| |||| ||| Sbjct 180483 TATTCAAACAATGCGTCAATAGTACAAATACTATCAATCCACAAAATTATCATGATTCAA 180424 Query 277 CA------AGGAGCCCC--------GAAGGGCGT-TGGTTTTTTATCTAATAAATACACC 321 || | | ||| ||| | || || | ||||||| | || Sbjct 180423 CATTCAACACTAAACCCTGTGACAGGAAAAGTGTAAAGTAGGATCACTAATAAGTGCA-- 180366 Query 322 CCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT 381 || | || || | ||||||||||||||||| ||||| | |||||||||| | Sbjct 180365 -ATTTCCAAAAATGGAAATAGGGCATGTATTAGCTCTAGCATTACTAGGGTTATCCATAT 180307 Query 382 AGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 | | || || || | ||||||| ||||||||||||||| |||| || | | Sbjct 180306 AACATATTAACATTGTGTAGATTATAACTGTTTTAATGAGCCATTCACAGTCTCGCCATC 180247 Query 442 TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 | | ||||||||| | |||||||||||||| |||||||||||||| Sbjct 180246 CATGTGGCTTATACTGGCATTTGCATGGCTTAATCCTTGAGACAAGCATA 180197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510393459968