Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq43 104 4e-20 seq46 95.1 2e-17 >seq43 Length=27552 Score = 104 bits (114), Expect = 4e-20 Identities = 103/131 (79%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 || || |||| |||| |||| | |||||| || |||||||||||||||||||||||| Sbjct 10895 ATCAACAGGGGTAGTTGGGGCCATTTGTATTCCATAGTCAGAGGTGAAATTCTTGGATTT 10954 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGT-TTTCATTAATCAGTGAACG 307 | |||||| ||| ||||||||||||| ||||||| | |||| |||| | ||| Sbjct 10955 TTGGAAGACATACTGCTGCGAAAGCGTTTGGCAAGGATATACCCCATTGATCA-AGGACG 11013 Query 308 AAAGTTAGGGG 318 ||||||||||| Sbjct 11014 AAAGTTAGGGG 11024 >seq46 Length=146086 Score = 95.1 bits (104), Expect = 2e-17 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 || || |||| |||| |||| | |||||| || |||||||||||||||||||| || Sbjct 1081 ATCAACAGGGGTAGTTGGGGCCATTTGTATTCCATAGTCAGAGGTGAAATTCTTGGGATT 1022 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGT-TTTCATTAATCAGTGAACG 307 | |||||| ||| ||||||||||||| ||||||| | |||| |||| | ||| Sbjct 1021 TTGGAAGACATACTGCTGCGAAAGCGTTTGGCAAGGATATACCCCATTGATCA-AGGACG 963 Query 308 AAAGTTAGGGG 318 ||||||||||| Sbjct 962 AAAGTTAGGGG 952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198929216