Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq43 138 5e-30 >seq43 Length=27552 Score = 138 bits (152), Expect = 5e-30 Identities = 104/121 (86%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||||||||||||||||||||||||||||||||| || | |||||||||||||||||||| Sbjct 13721 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAGTAAGATGAAGCCAGAGGAAACTCTG 13780 Query 624 GTG-GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 ||| || || | |||| ||| ||||||||||| |||| | ||||||||||||||| Sbjct 13781 GTGAAAGTCTGTGAACGGTGCTGACGTGCAAATCGCTCGTTTGACTTGGGTATAGGGGCG 13840 Query 683 A 683 | Sbjct 13841 A 13841 Score = 105 bits (116), Expect = 3e-20 Identities = 123/165 (75%), Gaps = 6/165 (4%) Strand=Plus/Plus Query 41 AGTCGAGTTGTTTGGGAATGCAGCTCTAAAT----GGGAGGTAAATTTCTTCTAAAGCTA 96 ||||| ||||||||| | | |||| ||| | ||| | || | || || || |||| Sbjct 13096 AGTCGGGTTGTTTGGTAGTACAGCCTTAATTTTGTGGGTGTTATAAATCATCCAAGGCTA 13155 Query 97 AATATTGGCCAGAG--ACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||| | |||| |||||||||| ||||||| |||| |||||||| |||| |||| Sbjct 13156 AATACCGTAAAGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGCAAAGAACTT 13215 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| || || || ||||| ||||| ||||||||| Sbjct 13216 TGAAAAGAGAGTGCAATAGTACTTGAAACCGTTGAGAGGGAAGCG 13260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079997490350