Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq17 253 5e-65 >seq17 Length=139726 Score = 253 bits (280), Expect = 5e-65 Identities = 304/408 (75%), Gaps = 4/408 (1%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||| ||| Sbjct 25461 TACCTGAAGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGC 25402 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| |||||||||||||||| | ||| |||| ||| | | ||| Sbjct 25401 AAGCGTTATCCGGAATCACTGGGCGTAAAGCGTCTGTAGGTGGTTTATCAAGTCTGCTGT 25342 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||| | |||||||||| || ||| | | |||| |||||||| || || Sbjct 25341 TAAAGCTTGAGGCTTAACCT-CAAAAAGCAGTGGAAACTGATAGACTAGAGAATGGTAGG 25283 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| ||||||| ||||||||||||||||| || ||| ||| || | Sbjct 25282 GGCAGAGAGAATTCTCAGTGTAGCGGTGAAATGCGTAGATATTGAGAAGAATACCGATAG 25223 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAA-GCGTGGGGAGCAAACA 301 ||||||| | ||||| | |||||| |||| |||||| || |||||||||| Sbjct 25222 CGAAGGCGCTCTGCTGGGCCATTACTGACACTCAGAGACGAAATGCTAGGGGAGCAAATG 25163 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG-GGGA-TTT 359 ||||||||||||| ||||||| ||| ||||| || ||||| ||||| | || | Sbjct 25162 GGATTAGATACCCCAGTAGTCCTAGCCGTAAACTATGGATACTAGATGTTGTGTGAGTAA 25103 Query 360 ACTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAAT 407 | || ||| || ||||||||||| |||| ||||||||| ||| Sbjct 25102 AATTGTGCAGTATCGAAGCTAACGCGTTAAGTATCCCGCCTGGGAAAT 25055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289598491168