Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq17 132 7e-29 >seq17 Length=139726 Score = 132 bits (146), Expect = 7e-29 Identities = 179/246 (73%), Gaps = 29/246 (12%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGT-ATACATCGACTTACCGTCTTCGCACGGAC 64 |||||| ||| ||||||||||||| || |||||||| ||||| | ||| || ||| Sbjct 22338 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCCATACATCGTCTTAC-GACTTAGCGGAGAC 22396 Query 65 CTGTGTTTTTAGTAAACAGTCGCTTC--CCTCTATTCTCTGCGACCACCACCAGCTCAAC 122 |||||||||| |||||||||||||| ||| || || ||| || Sbjct 22397 CTGTGTTTTTGGTAAACAGTCGCTTGGGCCTGGAT-CT-TGCAGCC-------------- 22440 Query 123 ACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATT 182 | | || || |||||||||| ||||||||||||||||||||||||||||||| Sbjct 22441 -CTTATTT-------AG-GGCACCCCTTTTCCCGAAGTTACGGGGCCATTTTGCCGAATT 22491 Query 183 CCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 ||||| | |||| | || | |||| |||| ||||||| ||||||||||| |||| Sbjct 22492 CCTTAGAGAGAGTTATCTCGCGCCCCTTGGTATACTCTACCAACCCACCTGTGTCAGTTT 22551 Query 243 ACGGTA 248 |||||| Sbjct 22552 ACGGTA 22557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694399212941