Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq17 75.2 1e-11 >seq17 Length=139726 Score = 75.2 bits (82), Expect = 1e-11 Identities = 125/172 (73%), Gaps = 14/172 (8%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-T 80 || |||| |||||| || | ||| || ||||| |||| || ||| || | | | | Sbjct 22554 CGTAAACTGACACAGGTGGGTTGGTAGAGTATACCAAGGGGCGCGAGATAA-CTCTCTCT 22496 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT-CCCTACCCAGAAATGG 139 |||||| | |||||| || ||| |||||||||||| || |||| |||| |||| Sbjct 22495 AAGGAATTCGGCAAAATGGCCCCGTAACTTCGGGAAAAGGGGTGCCCT------AAAT-- 22444 Query 140 GAGGGC-GCAGAGA-ATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 ||||| ||| ||| ||| ||| || |||||||| |||||||||||| || Sbjct 22443 AAGGGCTGCA-AGATCCAGGCCCAAGCGACTGTTTACCAAAAACACAGGTCT 22393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531199397918