Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq17 271 2e-70 >seq17 Length=139726 Score = 271 bits (300), Expect = 2e-70 Identities = 313/419 (75%), Gaps = 32/419 (8%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| | ||| ||||| | ||||||| ||||||| ||| ||||| Sbjct 22148 GCATCTTCACAGACAATTCTATTTCGCCGAGTCTCTCTCTGAGACAGTGCCCAAGTCGTT 22207 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22208 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 22267 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT---AGCTAACC-C 188 | ||||||||||||||| ||||||||||| | |||||||| | |||||||| Sbjct 22268 TAGTTACGGCCGCCGTTCACCGGGGCTTCAGTTGCTAGCTTCGCCATTAAAGCTAACCAG 22327 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCA-CACCCTATACGTCCACTTTCGTGTT 247 | || | ||||||||||||| |||||||||||| | ||| |||| || ||| || || Sbjct 22328 CTTCTTTAAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCCATACATCGTCTTACGACTT 22387 Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGA 307 || ||| |||||||||| ||||||||||| ||||||| ||||| ||| | Sbjct 22388 AGCGGAGACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTGG-ATCTT------GCA-GC 22439 Query 308 GCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTT 367 |||| || | ||| | |||| |||||||||||||| ||| | Sbjct 22440 CCTTA------------TTTA-------GGGCACCCCTTTTCCCGAAGTTACGGGGCCAT 22480 Query 368 TTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||||| | |||||| ||||| |||| || ||||||||| ||||||| | |||| Sbjct 22481 TTTGCCGAATTCCTTAGAGAGAGTTATCTCGCGCCCCTTGGTATACTCTACCAACCCAC 22539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260798524864