Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq17 360 4e-97 >seq17 Length=139726 Score = 360 bits (398), Expect = 4e-97 Identities = 297/352 (84%), Gaps = 9/352 (3%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | | ||||| |||||||| | ||||||||||||||| ||||| Sbjct 22148 GCATCTTCACAGACAATTCTATTTCGCCGAGTCTCTCTCTGAGACAGTGCCCAAGTCGTT 22207 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22208 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 22267 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG--ATT-GCTCTAA-CAG 182 ||||||||||||||||| || ||||||| |||| |||||| ||| |||| ||| Sbjct 22268 TAGTTACGGCCGCCGTTCACCGGGGCTTCAGTTGCTAGCTTCGCCATTAAAGCTAACCAG 22327 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAG-CTCCTATACATCGTCTTGCGACTT 241 | | | |||||||| |||| ||||||||||||| | || |||||||||||| |||||| Sbjct 22328 CTTCTTTAAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCCATACATCGTCTTACGACTT 22387 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCT-ATTCTCTGCGGCCTGTCAT 300 ||| || ||||||||||||||||||||||||||||||||| ||| ||| ||| | || Sbjct 22388 AGCGGAGACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTGGATCT-TGCAGCC-CTTAT 22445 Query 301 AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | |||||||||| |||| ||||||||||| ||||||||||| ||||||| Sbjct 22446 TTA-GGGCACCCCTTTTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTA 22496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062398756992