Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq17 459 8e-127 >seq17 Length=139726 Score = 459 bits (508), Expect = 8e-127 Identities = 404/495 (82%), Gaps = 9/495 (2%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 25048 CGCAAGAGTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 24989 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCT-CTGACCCCTCTAGAG 125 |||||||| ||||||||||||||||||||| |||||||| | || | | || || Sbjct 24988 TAATTCGATGCAACGCGAAGAACCTTACCAGGACTTGACATGTTACTAATTTC-CTTGAA 24930 Query 126 ATAGAGGTTTCCCCTTCGGGGGACAG-AGTGACAGGTGATGCATGGTTGTCGTCAGCTCG 184 | || | || || |||| || | ||||||| ||||||| ||||||||||||| Sbjct 24929 AGAGGAAAGTGCCTTT---GGGAAAGTAAACACAGGTGGTGCATGGCTGTCGTCAGCTCG 24873 Query 185 TGTCGTGA-GATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCAT 243 |||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct 24872 TGTCGTGAAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCTTTAGTTACCAT 24813 Query 244 CATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGAC 303 |||||||||||| ||||||| |||||||||||| ||||||||||||||| ||| || Sbjct 24812 CATTAAGTTGGGGACTCTAAAGAGACTGCCGGTGATAAACCGGAGGAAGGTAAGGATGAG 24753 Query 304 GTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAA 363 ||||| ||||||||||||||||| |||||||||||||||||||||||| | |||| Sbjct 24752 GTCAAGTCATCATGCCCCTTATGTCCTGGGCTACACACGTGCTACAATGGTTAGGACAAT 24693 Query 364 GGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAG 423 | || || || ||| | ||| |||| ||||| | ||||||| |||||||||| Sbjct 24692 AAGTCGCAAATTCGTGAGAACTAGCTAATCTTATAAACCTAATCTCAGTACGGATTGTAG 24633 Query 424 TCTGCAACTCGACTATATGAAGCTGGAA-TCGCTAGTAATCGTAGATCAGC-ATGCTACG 481 |||||||||| ||| |||||| |||| ||||||||||||| | ||||| | | || Sbjct 24632 GCTGCAACTCGCCTACATGAAGACGGAATTCGCTAGTAATCGCTGGTCAGCTACACAGCG 24573 Query 482 GTGAATACGTTCCCG 496 ||||||||||||||| Sbjct 24572 GTGAATACGTTCCCG 24558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503998240320