Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq43 255 9e-66 seq46 219 7e-55 >seq43 Length=27552 Score = 255 bits (282), Expect = 9e-66 Identities = 209/252 (83%), Gaps = 9/252 (4%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||| Sbjct 11520 TCAGTGTAGCCCGCGTGCAGCCCAGGACATCAAAGGGCATCACAGACCTGTTATTGCCTA 11461 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCAC-------CAAC 127 ||||||||| | || | |||||| ||||||||||| | ||| ||| Sbjct 11460 CAACTTCCATCCGTGAAAAACGAATAGTACCTCTAAGAAGTTTATCCATTTCCTTTCAAA 11401 Query 128 CATAGTCGATGGGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186 | | | ||| ||| |||||||| |||||||||||||||| |||||||||||||| Sbjct 11400 GAAAATAAATGCAAACTAGTTAGCAGGAAAAGGTCTCGTTCGTTAACGGAATTAACCAGA 11341 Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 11340 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATTCAATCAAGAAAGAGC 11281 Query 247 TATCAATCTGTC 258 |||||||||||| Sbjct 11280 TATCAATCTGTC 11269 >seq46 Length=146086 Score = 219 bits (242), Expect = 7e-55 Identities = 207/257 (81%), Gaps = 14/257 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA-GGGCATCACAGACCTGTTATTGCCT 74 |||||||||| ||||||| |||||| ||||| || ||||||||||||||||||||||||| Sbjct 449 TCAGTGTAGCCCGCGTGCAGCCCAGGACATCAAAAGGGCATCACAGACCTGTTATTGCCT 508 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCAC-------CAA 126 ||||||||| | || | |||||| ||||||||||| | ||| ||| Sbjct 509 ACAACTTCCATCCGTGAAAAACGAATAGTACCTCTAAGAAGTTTATCCATTTCCTTTCAA 568 Query 127 CCATAGTCGATGGGGCT--ATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCA 184 | | | | || | |||||||| |||||||||||||||| |||||||||||| Sbjct 569 AGAAAAGCAAATAAACTGGAGTTAGCAGGAAAAGGTCTCGTTCGTTAACGGAATTAACCA 628 Query 185 GACAAAT-CACTCCACCAACTAAGAACGGCCATGCACCACCACCCA-TAGAATCAAGAAA 242 ||||||| |||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct 629 GACAAATTCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATTCGGATCAAGAAA 688 Query 243 GAGCTATC-AATCTGTC 258 |||||||| |||||||| Sbjct 689 GAGCTATCAAATCTGTC 705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799096877