Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq17 194 3e-47 >seq17 Length=139726 Score = 194 bits (214), Expect = 3e-47 Identities = 180/226 (80%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 114 aCAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCC 173 ||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 21959 ACAGTTTCAGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCTAAA-AGTAACGGAGGCGTG 21901 Query 174 CAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTT 233 ||||| | ||||| ||| |||| || | | |||| ||||||| |||| | || Sbjct 21900 CAAAGGTTTCCTCAAACTGGTCAGAAATCAGTTGAAGAGTGTAAAGGCATAAGGAAGCTT 21841 Query 234 GACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCT 293 ||||||| || |||||| ||||| |||||||||||| |||| |||||||||||| | Sbjct 21840 AACTGCGAGACAAACAAGTCGAGCAGAGACGAAAGTCGGCCTTAGTGATCCGGCGGTTTT 21781 Query 294 GAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || ||||| |||||||||| |||||| |||| ||| || |||||| Sbjct 21780 GAGTGGAAGAGCCGTCGCTCAACGGAT-AAAGTTACTCTAGGGATA 21736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982398850592