Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq17 242 8e-62 >seq17 Length=139726 Score = 242 bits (268), Expect = 8e-62 Identities = 258/335 (77%), Gaps = 14/335 (4%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| || || ||||| | | | ||| ||| |||| || |||||||||||||||| Sbjct 25491 TTTACAACCCACAGGCCTTCATCC-CTCACACGGTATTG-CTCCATCAGGCTTTCGCCCA 25548 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 25549 TTGTGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAGT 25608 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| ||||||||||||| ||||||| ||| |||||| |||||||| |||||||||| || Sbjct 25609 GTGGCTGATCATCCTCTAAGACCAGCTACTGATCGTTGCCTTGGTAAGCCATTACCCTAC 25668 Query 182 CAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTT 241 ||||||||||||| | | |||||||| | |||| || | | ||| Sbjct 25669 CAACTAGCTAATCAGCCGCGAGCTCATCT------TCCAGGC----AGAT-AAATCTTTT 25717 Query 242 CTCCCGT-AGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 | || | | | | |||| ||| ||||| ||||||| | |||||||||| | || Sbjct 25718 CACCAATAATGGCATATGGGGTTTTAGCAATCGTTTCCAACTGTTATCCCCCTCCTAGAG 25777 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | |||||| | | ||||||||||||||||| || Sbjct 25778 GTAGATTCTCACGTGTTACTCACCCGTCCGCCACT 25812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071998745760