Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq17 223 1e-55 >seq17 Length=139726 Score = 223 bits (246), Expect = 1e-55 Identities = 342/477 (72%), Gaps = 32/477 (7%) Strand=Plus/Plus Query 136 CGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCA 195 |||||| ||| || |||||||||||||||||||||| | | ||| ||||||| ||||| Sbjct 23313 CGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCCGGGTTCGATTGGCATTTCA 23372 Query 196 CCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGG 255 || ||| ||||| |||||| || | |||||||| | ||| ||||||| ||||||| | Sbjct 23373 CCTCTAGCCACAACTCATCCGCTGATTTTTCAACATCAGTCGGTTCGGACCTCCACTTAG 23432 Query 256 TCTTACCCGCGCTTCAACCTGCCCATGGATA-GATCACTTCGCTTCGGGTCT-TGATC-G 312 | ||||| |||||| |||| ||||| || |||||| | ||||||||| | | | Sbjct 23433 TGTTACCTAAGCTTCATCCTGGTCATGGCTAGGATCACCCGGGTTCGGGTCTGTAAACAA 23492 Query 313 TGCCACTCATACGCCCTATTCGGACTCGCTTTC-GCTACGGCTAC------CCCACACGG 365 || | || ||| ||||| | ||||||||| || |||| | | | || Sbjct 23493 TG----ACCTATGCCTTATTCAGGCTCGCTTTCAACTCTGGCTTCGTTATTCTCTAAC-- 23546 Query 366 GTTAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCAC 424 ||||||| | || | | || |||| |||||||||||||| ||||||| || | Sbjct 23547 -TTAACCT---GCCATTGCCTACAAGTCGCCGGCTCATTCTTCAACAGGCACGAGGTTA- 23601 Query 425 CTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACA-TGGTTTCAGGTACT- 482 || | || | | || | | | ||||| || | ||||||| || || Sbjct 23602 ----AACGTTTTAGTCGTT----CTTCCTCTGCTTGTAAGCTTAGGGGTTTCATGTTCTA 23653 Query 483 ATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGG 542 |||||||||||| || ||||| ||||||| ||||||||||||||||| | | ||||||| Sbjct 23654 ATTTCACTCCCCTCCCGGGGTTCTTTTCAGCTTTCCCTCACGGTACTATTTCACTATCGG 23713 Query 543 TCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||| | |||| ||||||| |||| |||||||| ||||||||||| ||||||| Sbjct 23714 TCATCCAGGAATATTTAGCCTTACGAGGTGGTCCTCGCAGATTCACACCGAATTTCA 23770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817597873408