Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq17 178 3e-42 >seq17 Length=139726 Score = 178 bits (196), Expect = 3e-42 Identities = 294/410 (72%), Gaps = 21/410 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||| | || ||||| ||||||| || |||| |||| || ||| ||| | | Sbjct 22780 CGACTACGCTTTTCAGCCTCACCTTAGGTCCTGACTAACCCTCTGCGGACGAACCTTCCA 22839 Query 61 CTGGAACCCTTGGA-TAATCGGCGGACGGGA-TTCCCACCCGTCACA-CGCTACTCATGC 117 |||| |||||| | || | | | ||| ||| |||| | ||||||||| || Sbjct 22840 GAGGAATCCTTGGGGTTTTCAGGGCATTGGAATTCTCACCAATGTTTTCGCTACTCAAGC 22899 Query 118 CTGCATTCTCACTC--GCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGA- 174 | ||||||||||| || || ||||| | | | || | |||||| | || | Sbjct 22900 CGGCATTCTCACTTCTGCTTCG--TCCACGTC-CGTTTACACTAACGCTTCAAC-CTAAA 22955 Query 175 -CACGACGCTCCCCTACCCAACC----ACACAGGTTGCCACAGCTTCGGCGGATAACTTA 229 || ||||||||||||| | | ||| | |||| |||||| || ||||| Sbjct 22956 GCAAAACGCTCCCCTACCGATGTTTAGAAACATCT---CACATTTTCGGCAAATTACTTA 23012 Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCA 289 | ||| || ||| ||| || | ||||||||||||||||||||||||||||||||| | Sbjct 23013 -GTCCCATTA-ATTTTCGATGCAGGATCACTTGACCAGTGAGCTATTACGCACTCTTTAA 23070 Query 290 AGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCAC 349 ||||| |||||||| |||| |||||||||||||||| | |||| | |||| |||| Sbjct 23071 AGGATTGCTGCTTCTAAGCAAACCTCCTGGTTGTCTTTGTGTTCCCACTTTCTTTTCCAC 23130 Query 350 TGAGTCACCACTTA-GGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | ||| | | ||| ||||||||| || ||||||||||||||||||||| Sbjct 23131 TTAGTAATTATTTAGGGGGCCTTAAATGGTGATCTGGGCTGTTTCCCTCT 23180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177598622208