Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq17 172 9e-41 >seq17 Length=139726 Score = 172 bits (190), Expect = 9e-41 Identities = 210/284 (74%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 8 TTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCG 67 ||||| || || |||||| | | |||||| ||||||||| | ||| ||| || Sbjct 25180 TTTCGTCTCTGAGTGTCAGTAATGGCCCAGCAGAGCGCCTTCGCTATCGGTATTCTTCTC 25239 Query 68 TATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAA 127 ||||||||||||||||||||||||| |||||| |||| || | ||| || Sbjct 25240 AATATCTACGCATTTCACCGCTACACTGAGAATTCTCTCTGCCCCTACCATTCTCTAGTC 25299 Query 128 AAACAGTTTCAAATGCAGGCTATG-GGTTGAGCCCATAGTTTTCACATCTGACTTGCCTT 186 | ||||||| | ||| | || |||| |||| || ||| ||| | |||||| Sbjct 25300 TATCAGTTTCCACTGCTT--TTTGAGGTTAAGCCTCAAGCTTTAACAGCAGACTTGATAA 25357 Query 187 CCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTAC 246 || |||||| | |||||| |||| | | |||||||||||||||| ||| |||||||| Sbjct 25358 ACCACCTACAGACGCTTTACGCCCAGTGATTCCGGATAACGCTTGCATCCTCCGTATTAC 25417 Query 247 CGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||| ||||||||| |||||||| ||||||| Sbjct 25418 CGCGGCTGCTGGCACGGAGTTAGCCGATGCTTATTCTTCAGGTA 25461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828799060607