Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq17 374 3e-101 >seq17 Length=139726 Score = 374 bits (414), Expect = 3e-101 Identities = 291/343 (85%), Gaps = 4/343 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||| |||||||||||||||||| ||||| ||||||||||||| |||||||||||| | Sbjct 25688 CGCGGCTGATTAGCTAGTTGGTAGGGTAATGGCTTACCAAGGCAACGATCAGTAGCTGGT 25629 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 || ||||| ||||| |||||| ||||||||||| |||||||| ||||||||||||||||| Sbjct 25628 CTTAGAGGATGATCAGCCACACTGGAACTGAGATACGGTCCAGACTCCTACGGGAGGCAG 25569 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || |||||||||| ||||||||||| ||||| ||| ||||| ||||| Sbjct 25568 CAGTGGGGAATTTTCCACAATGGGCGAAAGCCTGATGGAGCAATACCGTGTGAGGGATGA 25509 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATA--ATGACGGTACTTGAGGAGG 397 |||||| |||| ||||| |||| | ||| | |||| | ||||||||| ||| || Sbjct 25508 AGGCCTGTGGGTTGTAAACCTCT-TTTTCAGGAAAGAAACTTTGACGGTACCTGAAGAAT 25450 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| |||||||||||||||||||||||| ||| || ||||||||||| Sbjct 25449 AAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCG 25390 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| ||| |||||||||| || ||||||||||| | ||||| Sbjct 25389 GAATCACT-GGGCGTAAAGCGTCTGTAGGTGGTTTATCAAGTC 25348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497598247808