Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq17 275 2e-71 >seq17 Length=139726 Score = 275 bits (304), Expect = 2e-71 Identities = 307/405 (76%), Gaps = 4/405 (1%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| ||| || |||| ||||||||| |||||||||||||||||||||||| ||| || Sbjct 25461 TACCTGAAGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGC 25402 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||||||||||| ||||||||||||| || ||||||||||| | ||||| | || Sbjct 25401 AAGCGTTATCCGGAATCACTGGGCGTAAAGCGTCTGTAGGTGGTTTATCAAGTCTGCTGT 25342 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 |||| | |||| |||| | | || | ||||||| | |||||| | ||| Sbjct 25341 TAAAGCTTGAGGCTTAACCTC-AAAAAGCAGTGGAAACTGATAGACTAGAGAATGGTAGG 25283 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 |||| |||||| ||||||||||||||||||||||||||| || ||| ||| | | Sbjct 25282 GGCAGAGAGAATTCTCAGTGTAGCGGTGAAATGCGTAGATATTGAGAAGAATACCGATAG 25223 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAA-GCGTGGGGAGCAAACA 299 |||||||| |||||| | | ||||||||| || ||||| || |||||||||| Sbjct 25222 CGAAGGCGCTCTGCTGGGCCATTACTGACACTCAGAGACGAAATGCTAGGGGAGCAAATG 25163 Query 300 GGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCG-GGGCGCAT 358 ||||||||||||| ||||||| ||||||||| ||| ||||||| ||| | | | | | Sbjct 25162 GGATTAGATACCCCAGTAGTCCTAGCCGTAAACTATGGATACTAGATGTTGTGTGAGTAA 25103 Query 359 AAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGG 403 || || | | || || ||| ||||| ||||||| || |||||| Sbjct 25102 AATTG-TGCAGTATCGAAGCTAACGCGTTAAGTATCCCGCCTGGG 25059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203198592256