Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq17 114 2e-23 >seq17 Length=139726 Score = 114 bits (126), Expect = 2e-23 Identities = 173/243 (71%), Gaps = 10/243 (4%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||||||| | | |||||||||| ||| | | ||| | ||| || | Sbjct 24161 GGTGGATACCTTGGCATCCAGAAGCGATGAAGGGCGTGGCTACCAACGAAATGCTTCGAG 24102 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 ||| | || || |||||||||| || | ||||||| || ||| | ||| Sbjct 24101 GAGCTGG-AAGCAAGCTTTGATCCGGAGGTACCCGAATGAGGCAACTC-----TTTAT-- 24050 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | || | ||||||| ||||||| || ||||||| | |||||||||||||| ||| Sbjct 24049 -ACTGTCTACTGAATATATAGGTAGATAAGAGCGAACTGCGTGAACTGAAACATCTTAGT 23991 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 | || ||||||||||| ||| | ||||||| ||||| ||||||||||| |||| || Sbjct 23990 AACTAAAGGAAAAGAAAGCAAAAGCGATTCCCCTAGTAGCGGCGAGCGAAAAGGGAACAG 23931 Query 249 CCT 251 ||| Sbjct 23930 CCT 23928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918398925472