Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq43 527 2e-147 >seq43 Length=27552 Score = 527 bits (584), Expect = 2e-147 Identities = 447/539 (83%), Gaps = 16/539 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATG--AGTCCCCCTTAGGACACCTGCGTTA 64 |||||| |||||| ||||||||| |||| | || | ||| ||||||||||||| Sbjct 15738 CTTTTGGTCTACATGAGATTTCTCGTCTCATCGGAAGCTCATCTTGGGACACCTGCGTTG 15679 Query 65 TGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGA 124 | |||| ||||||||||||||||||||||||||||||||||| | ||| || | || Sbjct 15678 TTATTTAGCAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACCACGTCCTCCAAACGAG 15619 Query 125 TCGGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGG--TGAAGACCAGTTC-CGCTTC 181 ||| || | | ||| || ||||| |||||| ||| |||| || ||| | |||||| Sbjct 15618 TCGTTCCACAACGGAAATTGACGCC-GAAAATACTCGTCTTGAAAACGAGTCCTCGCTTC 15560 Query 182 ATTGATTAAGTaaaaaaaCGATAAGG-GTAGTGGTATTTCACTTGCGCC--GAA----AC 234 || || ||||||||| || ||| || |||||||| ||||||| | | ||| || Sbjct 15559 ATGGAGTAAGTAAAACAA-GATTGGGAGTAGTGGTCTTTCACTGTTGTCATGAATTCGAC 15501 Query 235 GG-CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 | |||||||||| ||||||||| ||| || |||||| ||| ||||||||||||||| Sbjct 15500 TGACTCCCACTTAGCCTACACCTCCCAACTCGTTTCACTTGGTCAGACTAGAGTCAAGCT 15441 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||| ||| || ||||| |||||||||||||||||| ||||| Sbjct 15440 CAACAGGGTCTTCTTTCCCCTCTGTTTATACCAAGACCGTTCCCTTGGCTGTGGGTTCGC 15381 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 |||| | | ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 15380 TAGAAGGAAAATAGGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAG 15321 Query 414 ATGACGAGGCATTTGGCTACCTT-AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 472 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 15320 ATGACGAGGCATTTGGCTACCTTAAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 15261 Query 473 TTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 ||||| |||| || || |||||||||||||||||||||||||||||||||||||| || Sbjct 15260 TTGGTCGAATCTCGTCCATTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTAAA 15202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635198086816