Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq17 271 3e-70 >seq17 Length=139726 Score = 271 bits (300), Expect = 3e-70 Identities = 402/559 (72%), Gaps = 17/559 (3%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| |||||||||| ||||| |||| ||| |||||||| || |||||| | Sbjct 21819 TCGACTTGTTTGTCTCGCAGTTAAGCTTCCTTATGCCTTTACACTCTTCAACTGATTTCT 21878 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||| ||||| |||||||| |||||||||||| |||| ||||| | |||||||||| Sbjct 21879 GACCAGTTTGAGGAAACCTTTGCACGCCTCCGTTAC-TTTTAGGAGG-CGACCGCCCCAG 21936 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||| |||||| | ||||| | | || ||| | || ||| ||||| || | Sbjct 21937 TCAAACTGCCCACCTGAAACTGTTTCTTATCCGGATTACGGATCAAAATTAGAATTCTAG 21996 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCG--CATCATA 238 | || ||||||| ||| |||||||| | | || | | | | || || Sbjct 21997 TTTTACTAGGGTGGTATCTCACTGCCGACTCCA--ATCTCTCCGGAGAAAGATCTTCTTA 22054 Query 239 GTCTCCCACCTATCCTACACAAACCGCACC-GAATGCCAATACCAAGCTATAGTGAAGGT 297 ||||||||||||| || | ||| | ||| |||| | ||| || |||| ||| ||| | Sbjct 22055 GTCTCCCACCTATTCTGCGCAAGCAAAACCCGAATTC-AATTTCAGGCTACAGTAAAGCT 22113 Query 298 CCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCA 356 | |||||||| |||| | || | | ||||||| || | | | ||||| Sbjct 22114 TCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACAATTCTATTTCG 22173 Query 357 CCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTA 416 ||| | || | |||||||| |||||||||||| ||||||| |||||||||||| Sbjct 22174 CCGAGTCTCTCTCTGAGACAGTGCCCAAGTCGTTACGCCTTTCGTGCGGGTCGGAACTTA 22233 Query 417 CCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGC 476 |||||||||||||||||||||||||||| ||||||||||| |||||||| || ||||| Sbjct 22234 CCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGC 22293 Query 477 TTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAG-TCCTCTTAACCTTCCAGC 535 |||| || | || || | || | ||| || || | || | |||||||| || Sbjct 22294 TTCAGTTGCTAGCTTCGC-CATTA------AAGCTAACCAGCTTCTTTAAACCTTCCGGC 22346 Query 536 ACCGGGCAGGCGTCAGTCC 554 || ||||||||||||| || Sbjct 22347 ACTGGGCAGGCGTCAGCCC 22365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702398008192