Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq17 174 3e-41 >seq17 Length=139726 Score = 174 bits (192), Expect = 3e-41 Identities = 206/279 (74%), Gaps = 19/279 (7%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||||||||||||| | |||||| ||| Sbjct 25421 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCTTCAGGTAC---------------CGT 25465 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 ||| ||| || ||| | |||||| |||||||| || || ||||||||| |||| | Sbjct 25466 CAAAG--TTTCTTTCCTGA-AAAAGAGGTTTACAACCCACAGG-CCTTCATCCCTCACAC 25521 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 25522 GGTATTGCTCCATCAGGCTTTCGCCCATTGTGGAAAATTCCCCACTGCTGCCTCCCGTAG 25581 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| |||||||| ||||||||||| ||||| || | |||||| ||| | ||| || Sbjct 25582 GAGTCTGGACCGTATCTCAGTTCCAGTGTGGCTGATCATCCTCTAAGACCAGCTACTGAT 25641 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 ||| | || ||| ||| |||||| || |||| ||||| Sbjct 25642 CGTTGCCTTGGTAAGCCATTACCCTACCAACTAGCTAAT 25680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068798749504