Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq197 91.5 4e-16 seq163 91.5 4e-16 seq138 91.5 4e-16 seq116 91.5 4e-16 seq109 91.5 4e-16 seq49 91.5 4e-16 seq7 91.5 4e-16 >seq197 Length=2557 Score = 91.5 bits (100), Expect = 4e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 101 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 160 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCG 162 || || ||||| |||||||||||| |||||||| Sbjct 161 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTCG 195 >seq163 Length=5244 Score = 91.5 bits (100), Expect = 4e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 5019 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 4960 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCG 162 || || ||||| |||||||||||| |||||||| Sbjct 4959 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTCG 4925 >seq138 Length=7403 Score = 91.5 bits (100), Expect = 4e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 102 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 161 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCG 162 || || ||||| |||||||||||| |||||||| Sbjct 162 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTCG 196 >seq116 Length=17007 Score = 91.5 bits (100), Expect = 4e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 244 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 303 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCG 162 || || ||||| |||||||||||| |||||||| Sbjct 304 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTCG 338 >seq109 Length=22084 Score = 91.5 bits (100), Expect = 4e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 21915 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 21856 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCG 162 || || ||||| |||||||||||| |||||||| Sbjct 21855 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTCG 21821 >seq49 Length=78402 Score = 91.5 bits (100), Expect = 4e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 24 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 83 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCG 162 || || ||||| |||||||||||| |||||||| Sbjct 84 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTCG 118 >seq7 Length=203469 Score = 91.5 bits (100), Expect = 4e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 203242 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 203183 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCG 162 || || ||||| |||||||||||| |||||||| Sbjct 203182 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTCG 203148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260796986688