Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq197 78.8 2e-12 seq163 78.8 2e-12 seq138 78.8 2e-12 seq116 78.8 2e-12 seq109 78.8 2e-12 seq49 78.8 2e-12 seq7 78.8 2e-12 >seq197 Length=2557 Score = 78.8 bits (86), Expect = 2e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 ||||| || ||| ||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 101 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 160 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 || |||||||| ||||||||||| |||||| Sbjct 161 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTT 193 >seq163 Length=5244 Score = 78.8 bits (86), Expect = 2e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 ||||| || ||| ||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 5019 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 4960 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 || |||||||| ||||||||||| |||||| Sbjct 4959 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTT 4927 >seq138 Length=7403 Score = 78.8 bits (86), Expect = 2e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 ||||| || ||| ||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 102 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 161 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 || |||||||| ||||||||||| |||||| Sbjct 162 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTT 194 >seq116 Length=17007 Score = 78.8 bits (86), Expect = 2e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 ||||| || ||| ||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 244 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 303 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 || |||||||| ||||||||||| |||||| Sbjct 304 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTT 336 >seq109 Length=22084 Score = 78.8 bits (86), Expect = 2e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 ||||| || ||| ||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 21915 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 21856 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 || |||||||| ||||||||||| |||||| Sbjct 21855 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTT 21823 >seq49 Length=78402 Score = 78.8 bits (86), Expect = 2e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 ||||| || ||| ||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 24 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 83 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 || |||||||| ||||||||||| |||||| Sbjct 84 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTT 116 >seq7 Length=203469 Score = 78.8 bits (86), Expect = 2e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 ||||| || ||| ||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 203242 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 203183 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 || |||||||| ||||||||||| |||||| Sbjct 203182 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTT 203150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062397460864