Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq143 104 4e-20 seq163 86.0 1e-14 >seq143 Length=7056 Score = 104 bits (114), Expect = 4e-20 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| | | Sbjct 6984 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGATCCCT-TNAA 7042 Query 95 TGGGTGAACAATCC 108 ||||||||||||| Sbjct 7043 CGGGTGAACAATCC 7056 >seq163 Length=5244 Score = 86.0 bits (94), Expect = 1e-14 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTC 86 |||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 52 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGATC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854397957984