Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq197 89.7 2e-15 seq163 89.7 2e-15 seq138 89.7 2e-15 seq116 89.7 2e-15 seq109 89.7 2e-15 seq49 89.7 2e-15 seq7 89.7 2e-15 >seq197 Length=2557 Score = 89.7 bits (98), Expect = 2e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 101 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 160 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 || |||||||| ||||||||||| ||||||| Sbjct 161 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTC 194 >seq163 Length=5244 Score = 89.7 bits (98), Expect = 2e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 5019 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 4960 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 || |||||||| ||||||||||| ||||||| Sbjct 4959 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTC 4926 >seq138 Length=7403 Score = 89.7 bits (98), Expect = 2e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 102 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 161 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 || |||||||| ||||||||||| ||||||| Sbjct 162 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTC 195 >seq116 Length=17007 Score = 89.7 bits (98), Expect = 2e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 244 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 303 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 || |||||||| ||||||||||| ||||||| Sbjct 304 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTC 337 >seq109 Length=22084 Score = 89.7 bits (98), Expect = 2e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 21915 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 21856 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 || |||||||| ||||||||||| ||||||| Sbjct 21855 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTC 21822 >seq49 Length=78402 Score = 89.7 bits (98), Expect = 2e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 24 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 83 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 || |||||||| ||||||||||| ||||||| Sbjct 84 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTC 117 >seq7 Length=203469 Score = 89.7 bits (98), Expect = 2e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 203242 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 203183 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 || |||||||| ||||||||||| ||||||| Sbjct 203182 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTC 203149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702395931264