Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq163 95.1 4e-17 seq143 95.1 4e-17 >seq163 Length=5244 Score = 95.1 bits (104), Expect = 4e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| || || ||||||||||||| |||||||||||| ||||| || ||||| | | Sbjct 1879 ATTGGGCAAGTTCCGCGCCTGCTGCCGTCCTTGGATGTGCGGGCCGTCTCGCAGGCCCGC 1820 Query 133 TCTCCGGAATCGAACCCTAATTCCCCG 159 |||||||| ||||||||| |||| ||| Sbjct 1819 TCTCCGGAGTCGAACCCTGATTCTCCG 1793 >seq143 Length=7056 Score = 95.1 bits (104), Expect = 4e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| || || ||||||||||||| |||||||||||| ||||| || ||||| | | Sbjct 5157 ATTGGGCAAGTTCCGCGCCTGCTGCCGTCCTTGGATGTGCGGGCCGTCTCGCAGGCCCGC 5216 Query 133 TCTCCGGAATCGAACCCTAATTCCCCG 159 |||||||| ||||||||| |||| ||| Sbjct 5217 TCTCCGGAGTCGAACCCTGATTCTCCG 5243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510396390144