Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498735.1_202013-11-25] 543 sequences; 12,009,633 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq507 219 7e-55 >seq507 Length=1481 Score = 219 bits (242), Expect = 7e-55 Identities = 173/203 (85%), Gaps = 7/203 (3%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| | | Sbjct 1372 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGATCCCT-TGAA 1314 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCG---GTATGATAGGAAGAGCCGAC 151 ||||||||||||| |||||| ||| | | | || | | | |||||||||||||| Sbjct 1313 CGGGTGAACAATCCGACGCTT-CCGCG--CCGGTGCGCGCGGACGGTAGGAAGAGCCGAC 1257 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||| | |||| ||| ||||||||||||||||||| Sbjct 1256 ATCGAAGGATCAAAAAGCCGCGTCGCTGCGGGCGCTCGGCGGCCACAAGCCAGTTATCCC 1197 Query 212 TGTGGTAACTTTTCTGGCACCTC 234 |||||||||||||||| |||||| Sbjct 1196 TGTGGTAACTTTTCTGTCACCTC 1174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854395360608