Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498735.1_202013-11-25] 543 sequences; 12,009,633 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq507 208 2e-51 >seq507 Length=1481 Score = 208 bits (230), Expect = 2e-51 Identities = 201/256 (79%), Gaps = 4/256 (2%) Strand=Plus/Minus Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA--GCCCGTT 334 ||| || ||||||||||||| ||||||||||| |||||||| ||| || ||||||| Sbjct 877 CGGGCTGGAGTCAAGCTCAAAAGGGTCTTCTTGCCCCGCTGG--CCGGCACTCGCCCGTT 820 Query 335 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 394 ||| | ||| | ||||| | | | |||||||||||| |||||| |||||| Sbjct 819 CCCGAGTCTGGAGGTTCGCGGAGGCGCGGCTCGGGACAGTGGGATCCTCGTTGGTCCATT 760 Query 395 CATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT 454 ||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 759 CATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT 700 Query 455 CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514 ||||||||||||| | |||||| | || ||||||| |||| || ||||||||||| Sbjct 699 CCCGCCGTTTACCAGGGCTTGGGCGGATCTCTTCACGGTGACTGTCGTGGCACTGGGCAG 640 Query 515 AAATCACATTGCGTCA 530 ||||||| | ||| || Sbjct 639 AAATCACGTCGCGCCA 624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635191120864