Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498735.1_202013-11-25] 543 sequences; 12,009,633 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq175 98.7 3e-18 seq324 95.1 4e-17 seq156 95.1 4e-17 seq49 86.0 2e-14 >seq175 Length=17725 Score = 98.7 bits (108), Expect = 3e-18 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| || || ||||||||||||| |||||||||||| ||||| |||||||| | | Sbjct 236 ATTGGGCAAGTTCCGCGCCTGCTGCCGTCCTTGGATGTGCGGGCCGTCTCTCAGGCCCGC 295 Query 133 TCTCCGGAATCGAACCCTAATTCCCCG 159 |||||||| ||||||||| |||| ||| Sbjct 296 TCTCCGGAGTCGAACCCTGATTCTCCG 322 >seq324 Length=4847 Score = 95.1 bits (104), Expect = 4e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| || || ||||||||||||| |||||||||| | ||||| |||||||| | | Sbjct 4703 ATTGGGCAAGTTCCGCGCCTGCTGCCGTCCTTGGATGCGCGGGCCGTCTCTCAGGCCCAC 4762 Query 133 TCTCCGGAATCGAACCCTAATTCCCCG 159 |||||||| ||||||||| |||| ||| Sbjct 4763 TCTCCGGAGTCGAACCCTGATTCTCCG 4789 >seq156 Length=24093 Score = 95.1 bits (104), Expect = 4e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| || || ||||||||||||| || ||||||||| ||||| |||||||| | | Sbjct 6237 ATTGGGCAAGTTCCGCGCCTGCTGCCGTCTTTGGATGTGCGGGCCGTCTCTCAGGCCCGC 6178 Query 133 TCTCCGGAATCGAACCCTAATTCCCCG 159 |||||||| ||||||||| |||| ||| Sbjct 6177 TCTCCGGAGTCGAACCCTGATTCTCCG 6151 >seq49 Length=66407 Score = 86.0 bits (94), Expect = 2e-14 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 75 TGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTC 134 |||| || | ||||||||||||| |||||||||||| ||||| |||||||| | || Sbjct 6094 TGGGCAAGCTCCGCGCCTGCTGCCGTCCTTGGATGTGCGGGCCGTCTCTCAGGCCCGTTC 6035 Query 135 TCCGGAATCGAACCCTAATTCCCCG 159 |||||| ||||||||| |||| ||| Sbjct 6034 TCCGGAGTCGAACCCTGATTCTCCG 6010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510391798528